Fusarium falciforme: NCS54_01027300
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Entry
NCS54_01027300 CDS
T09198
Name
(RefSeq) DNA-directed RNA polymerase subunit beta
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCS54_01027300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_01027300
Enzymes [BR:
ffc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCS54_01027300
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
NCS54_01027300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
DUF570
Motif
Other DBs
NCBI-GeneID:
77796222
NCBI-ProteinID:
XP_053011563
LinkDB
All DBs
Position
8:complement(join(1417472..1420699,1420752..1421222))
Genome browser
AA seq
1232 aa
AA seq
DB search
MAPSATNTEWDHEYHTLRRENLFRNPPKDHTAYPALQLAIDPHIESFNGLFRDDGKPGLL
THGLADIGTKTFLDGDERAGPQGKNRLTIRYKDVFLQKPQVPPSNKMARNRQIFPAECRE
RHVTYRGRLSATLEYRINGGDPIEFVREFGQVPIMIKSNRCHLEGNSPALLVERKEESEE
LGGYFIVNGIEKIIRMLQLNKRNFPMAINRPSFQNRGPGYTPYGIILRAVRPDETSQTNV
LHYLNDGNMTFRFSWRKNEYLIPVMMILKALVETNDREIFEGLVGPVGSKSTENTFLTDR
IELLLRTYKSYNLYSKSETRAYLGEKFRVVLGVPDTMSNLDVGTEFLRRIVLVHLGNVDV
TEEQDNEKFKLLLFMIRKLYALVAGECAVDNPDAVQNQEILLGGFLYGQILKERLDEFLS
VNVRASLRDYLRRHPTVPFTSEDFRKDFPNNIFRKANENLGNALEYFLSTGNMQSPSGLD
LQQTAGFTVVAEKLNFLRFISHFRMVHRGAFFAQLKTTAVRKLLPESWGFMCPVHTPDGA
PCGLLNHLAHKCKIMTDSVDVSHIAALAAELGIVDVSSASTEENVVVMLDGKILGFCTPK
ESIRIADCFRYWKVEGTHGVPLQLEIGYVPPSHGGSYPGIYMTSTPARMVRPVKYLPLQK
EDWVGPYEQPYMSIAVVPQEVESGKSTHVEFDPTNMLSILANMTPFSDFNQSPRNMYQCQ
MGKQTMGTPSTNLRYRTDNKSYRIQTGQTPVVRAPLHNTYGFDNFPNGMNAVVAVISYTG
YDMDDAMILNKSAHERGFGHGTIYKTKKISLKDDSRTKATKSVTKAFGFAPHSYVSASYQ
GMLDDDGLPHVGRMIQEGDVICAWHTVTPDYNGKLVNLDGITHYEKYKDAETGFVEEVRL
IGAETGNEPLQTISVKFRVPRSPIIGDKFSSRHGQKGVASQKWPTVDLPFSETGIQPDII
INPHAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFKFDEENTAADYFGHQLMKAGYNYH
GNEPMYSGITGEELAADIYIGVVYYQRLRHMVNDKYQVRTTGPVVPTTGQPIKGRKRGGG
IRVGEMERDALLAHGTAFLLQDRLLNCSDYSRSWICRRCGSFLSVQPTVSQFAPGKKKAA
SIVRCRNCAVKLDDAEGIDLTEIQGEIWEDGQGNSWVGGDHTTQVVVPGALKYLDVELAA
MGIKLKYRVDRTDEPRKGPMRPMSLDGVRVGK
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctcagccaccaacaccgaatgggaccatgagtaccacactctccgccgagag
aacctcttccgaaaccctcccaaggatcacactgcgtatcctgcccttcaattagccatc
gatccccatattgagtccttcaatggtctcttccgcgacgatggcaagcctggcttgctg
acgcatggtctggccgacattggcaccaagacctttctcgacggtgacgagcgggctgga
cctcaaggcaagaaccgcctgaccattcgatacaaggatgtctttctccagaaaccccag
gttccgccttctaacaagatggcccggaaccgacaaatctttcccgccgagtgcagagag
cgtcacgtaacatatcgaggaaggctctcagctaccctcgaataccgcatcaacggtggc
gatcccattgaattcgtccgcgagtttggccaggtgcccatcatgatcaagtccaaccgc
tgccatcttgagggcaactcgcctgcccttctcgttgagcggaaagaagagtccgaggag
ctgggtggctactttatcgtcaacggtattgaaaagatcattcgaatgctgcaattgaac
aagagaaacttccccatggccatcaaccgacctagtttccagaaccgtggccccggctac
accccgtacggtattattctccgcgcagttcgacccgacgagacgtctcagaccaacgtt
ctccactacctcaacgatggaaacatgactttccgtttctcatggcgcaagaacgagtat
cttattccggtcatgatgatcctcaaggcgctcgtcgagaccaacgaccgcgagatcttt
gagggtctggttggccctgttggatcaaaatcgaccgaaaacaccttccttacggaccga
atcgagttgcttttgcggacgtacaagtcctacaacctttacagcaagtcggagacgagg
gcgtacctgggtgaaaaattccgggttgtgcttggagttcctgacaccatgtccaacctc
gacgttggtaccgaattcctccgaagaattgtcctggttcatctcggaaatgtcgacgtg
acggaggagcaggacaatgagaagttcaagctgcttctcttcatgatccgcaagctctat
gcgctcgtcgctggcgagtgcgctgtcgacaaccccgatgctgtccagaaccaggagatt
ctgctgggaggtttcttgtatggtcaaatcctcaaggagcgtctcgatgagttcctgagc
gttaacgtccgcgcgtccctgcgagattacctccgccggcatccaactgttccctttact
tctgaagatttccgcaaggacttcccaaataacattttccggaaggccaacgagaatctc
ggaaatgccctggagtatttcttgtccacgggtaacatgcagagtccatctggactcgat
cttcagcagactgcaggtttcacagttgtggctgaaaagctcaactttttgcgattcatc
agtcacttccgcatggtgcatcgaggtgccttctttgcccagctcaagacaactgctgtg
cgaaagctgctccccgaatcatggggcttcatgtgtcctgtccacacgcctgatggtgcg
ccctgtggtcttctgaaccatcttgcgcacaagtgcaagatcatgaccgattcggtcgac
gtctcccatatcgcggctcttgctgccgagcttggaatcgttgacgtttcgtcagcctcg
accgaggagaatgtcgtggtcatgcttgacggcaagattcttggtttctgcactcccaag
gagtcgatcagaatcgcggattgtttccggtactggaaggttgagggcacacacggcgtg
cctctgcaactggagattggttacgttcctccgtctcatggcggctcctatcccggcatt
tacatgacatctacgcctgcgagaatggtgcgacccgtcaagtacctccctctccagaag
gaggattgggttggtccctacgagcagccttacatgtccatcgccgtggtgccgcaggag
gtcgagtctggaaagtctacgcacgtcgagtttgatcccaccaacatgctgtcgattctc
gccaacatgacccccttctcggacttcaaccagtcacctcgaaacatgtaccagtgtcag
atgggtaagcaaaccatgggaacccccagcactaatcttcgctaccgaaccgacaacaag
tcataccgcatacaaactggacaaacacccgtcgtgcgagcgcctcttcacaacacatat
ggtttcgacaacttccccaacggcatgaacgcggttgtcgctgtcatctcgtacactgga
tacgacatggacgacgccatgattctcaacaagagcgcccatgagcgtggctttggacat
ggtaccatctacaagaccaagaagatctcgctcaaggatgactcgcgaacaaaggccacc
aagagtgttaccaaggcttttggcttcgcaccacacagctatgtgagcgcgtcataccag
ggaatgctggatgacgacggcctgcctcacgtgggccgcatgatccaggagggagatgta
atctgcgcgtggcacacggtgacgcccgactacaatggcaagctggtgaacctggatggc
atcactcactacgaaaagtacaaggatgccgagacgggctttgtcgaagaggtccgcctg
atcggagccgaaaccggcaacgagcctctgcagaccatctctgtcaagttccgtgttccc
cgatctcccatcatcggtgacaagttctcgtccagacacggacagaagggtgtcgcctcg
caaaagtggccaacggtggatctgcccttctcggagactggcatccaaccggacattatc
attaacccccacgctttcccttcccgtatgacgataggcatgtttgtggaatcgctcgcc
ggcaaggctggcgcgctgcatggccttgcgcaagactcgacaccgttcaagtttgacgag
gagaacactgcggcggactattttggccaccagctgatgaaggccgggtacaactaccac
ggcaatgagcccatgtactcgggcattacgggagaggagctcgcagctgacatctacatc
ggagttgtctactaccagcgtctgcgacacatggtcaacgataagtaccaggtgcgaacc
actggtccagtggtgccgacaacaggccagcccatcaagggccgaaagaggggcggtggt
atccgtgtgggagagatggaacgtgatgcgctgttggctcacggaacggcctttttgctc
caggatcgtctcctcaactgttcggattattccaggtcgtggatctgccgccgctgcggt
tcgttcctctctgtgcagcccaccgtgtcgcagtttgcaccaggcaagaagaaggcggcc
agcattgtgcgatgccgcaactgcgccgtcaagctggacgacgccgagggcatcgacctc
accgagatccagggcgagatctgggaggacggccagggcaactcttgggtaggtggcgat
cacacgacgcaggttgtcgtccccggcgctctcaagtacctcgacgtcgagctggcagcc
atgggcatcaagctcaagtaccgcgtggaccgcaccgacgagcctcgcaaggggcccatg
aggcccatgtcgttagacggagttcgggttggaaaatag
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