Fusarium falciforme: NCS54_01055000
Help
Entry
NCS54_01055000 CDS
T09198
Name
(RefSeq) DNA-directed RNA polymerase subunit
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCS54_01055000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffc03021
]
NCS54_01055000
Enzymes [BR:
ffc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCS54_01055000
Transcription machinery [BR:
ffc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
NCS54_01055000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
77796499
NCBI-ProteinID:
XP_053011829
LinkDB
All DBs
Position
8:complement(join(2395587..2400429,2400485..2400666))
Genome browser
AA seq
1674 aa
AA seq
DB search
MNIAQPVASGVESVEFTFLSPKEIRSISVKRIENDSTFDNLLNPVPGGLYDPALGSWGDA
PCTTCNLNQSTCPGHAGHIQLPVPVYHPVFMDQAYRLLKAACVYCKGFRLPQKELHKYVC
KLKLLQHGLIQEAHIVGAIGENDLAIELGDFSGLESEAEEEGDSNSIDNVTRARDRYVDK
CLRGIKVKRGETKRGKHEGASEMRREIIKEFLAEITKRRICASCGGISPSYRKDRFVKVF
ERSLSDKEKAKMAQKNFKQADAMARVHQATTKQRPDGYSSDEGVADVGSPTREKAQADED
GADQDIDMPDADTAAAAVPQRYISAMEVQARLNELFTKEQELMALLYNAKPATRSSSKVT
PDMFFLTILMVPPNRYRPEARTGDSQISEAQQNSLYKNILRGCGKIAQLHAHLQEERADV
NQLHQAWTELQESVNALIDKDKNPVQGAAAKRNEDGIKQKLEKKEGLFRKNMMGKRVNYA
ARSVISPDPNIETNEIGVPPVFAKKLTYPEPVTSHNFRDMQQAVINGVDKWPGAFAIENE
NGQIVNLRNKSVDDRVSLANQLLAPTSSNAARTRNKKVYRHLTNGDVVLMNRQPTLHKPS
IMGHRVRVLPNEKTIRMHYANCNTYNADFDGDEMNMHFPQNEVARAEALQIADTDHQYLS
YTAGKPLRGLIQDHISVSVALCNRDTFFSRGDYQQLVYNALRPESGHIVGERIELVAPAV
IRPVPRWTGKQVITTILKNMQPPNCGGLCMRAETQIKASQWGKDSEEGVVLFQDGEFITG
ILDKSQIGPSSGGVVHAVHEIYGPAIAGKLLSSLGRLLTRYLNMRAFSCGMDDLRLTPEG
EKARREALVPANTVGLNVASSYVSLEQNPGPRDPLLLERLEEVMRDDSKQEGLDLLMKEG
LSGITDKVQTACVPNGLEKPFPKNQMQAMTTSGAKGSRVNASLISCNLGQQVLEGRRVPI
MVSGKSLPCFNPFETHARAGGYIVQRFLTGIRPQEYYFHHMAGREGLIDTAVKTSRSGYL
QRCVIKGMEGLTVAYDTTVRDADGSMIQFLYGEDGLDVTKQKYLNDFSFILENVTSQAAQ
LKYDPSIGDRLGQHREVIAKYMKKALKHVKAHDPKAQDPLSSMFNPATTAFATSENFYQA
MTSYLKENKDGLVRDKSDKKKLALSRVSLNRKNAEMLFAMKYLRSLVEPGEAVGIVAGQS
VGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREILMTASDKISTPAMSLYPIDEMSTADAE
TFAKSISVLPLGYILDSISVEEKVGRGKMYGSAKVYRVDLKFFASEEYTKTYAISVSDVM
DAVERKLLHRLLSFVKKDIKKRQSQSTMATPEIGVKAGVVETAAPNAEAIRDEDDDDDEG
DDDATNAKQRANRTEAVSYGPNDDDDDAVQQEMARDAADDMDEDEGIGSSPRMAPVDDDD
DEDGIDWSAKARTERVLDSYAEVTDFTFDAKSGTDCSFTLEFDSTIPKVLMLNLVQEAVK
KTVVQEISGVGACTFVEEKGVRVIHTAGVNLQAMQRYSDFIDPHRIQTNDIAAVLAVYGV
EAARSNIVQELAGVFGSHGIKVDNRHLNLIGDHMTRNGGFTPFNRMGLKGNVSPFTKMSF
ETTLSFLKDAVLDGDWDDLATPSGRSVMGKLGKVGTGGFNVLAQLPTYHVDSLA
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcacagcctgtcgcctccggggtggagagtgtcgagtttacgttcctgtcg
ccaaaggagatccgatccatttcggtgaagcgaatcgagaacgacagtaccttcgacaac
ctcctcaatccagtaccaggcggtctgtacgatcctgcgctcggttcttggggtgatgcg
ccatgcacaacttgtaacttgaaccagtctacgtgccccggccatgccggacacatccaa
ctccccgtccctgtctatcacccagtgtttatggaccaggcctatcgactcctcaaagcc
gcctgcgtgtactgcaagggctttcgactcccccagaaagaattgcacaagtatgtgtgc
aagctgaagctcctccagcatggcttgattcaggaagcgcacattgttggcgccattggc
gagaatgacctagccatcgagctgggtgacttttcaggactggaaagtgaggccgaggag
gaaggtgacagcaattccatcgacaacgtcactcgcgcaagagacagatatgtcgacaag
tgtcttcgcggcatcaaggtcaagcgaggtgaaacgaagcgaggaaaacacgagggcgca
agcgaaatgcgacgagagatcatcaaggaatttcttgccgagatcaccaagaggagaata
tgcgccagctgtggcggtatctccccatcctatcgcaaggatcgctttgtcaaggttttc
gagagatccttgtcagacaaggagaaggccaagatggctcagaagaacttcaagcaagcc
gacgctatggcgagagttcaccaagctacgacaaagcagaggccggatggatattcatcc
gacgagggtgttgcggatgtgggctcgccaactcgcgaaaaggcgcaggctgatgaggat
ggtgctgatcaagatatcgacatgcccgacgccgacaccgctgctgctgccgtcccgcag
aggtacatcagtgcaatggaagtccaagcacgcctgaacgagcttttcaccaaggaacag
gaactgatggctcttctttacaatgccaagccagccacacgaagctcctccaaggttact
ccggacatgttcttcctgacgatcctcatggtaccgcccaaccgataccgtccagaggct
cgtacgggcgactcccaaatctcggaggctcaacagaactcgctgtacaagaacattctt
agaggttgcggaaaaattgcccagcttcatgcgcatctccaggaagagcgagcagatgtc
aaccagcttcaccaggcctggaccgagttgcaagagtcagtcaacgccctcattgacaag
gataagaacccagtccagggcgccgcggcaaagcgcaatgaagacggtatcaagcagaag
cttgagaagaaagagggtctgttcagaaagaacatgatgggaaagcgagtcaactacgcc
gcccgaagtgtcatctcgccggatcccaacatcgagaccaacgaaatcggtgttccgcct
gtattcgccaagaagctcacatatcccgaaccggtgaccagccataacttccgcgacatg
cagcaggccgtcatcaatggtgtggacaagtggcccggcgctttcgcgatcgagaatgag
aacggtcaaatcgtcaaccttcgaaacaagtccgttgacgaccgcgtgtcactggcaaac
cagcttctcgctcctacaagcagcaacgctgctcgaaccaggaacaagaaggtctatcgt
cacctcaccaacggtgatgttgtcttgatgaaccgtcagccgaccctgcacaagccgtcc
atcatgggacatcgagtacgagttctgccgaacgagaagacgatccgaatgcactacgcc
aactgtaacacctacaacgccgatttcgatggtgatgaaatgaacatgcatttcccccag
aacgaagttgcccgagccgaagcccttcagattgccgacaccgatcaccagtacctgtcc
tacaccgcagggaagcccctccggggtctcattcaggatcacatttccgtgtccgtcgcc
ctctgcaaccgagacacgtttttcagccgcggtgattatcaacagctggtgtacaacgcc
ttacgccctgaaagcggacacatcgtcggcgagaggattgagcttgtcgccccagccgtg
atccggccagttcccaggtggaccggcaagcaagtcatcaccactatcctcaagaacatg
cagccacccaactgtggcggtctttgcatgagggcagagactcagatcaaggccagtcag
tggggcaaagactcggaagagggtgtcgttctgttccaggatggcgaattcattactgga
atcctggataagtcacagattggtcccagttcgggtggtgttgtccacgctgttcatgag
atttacggccctgctattgcaggtaagctgctcagcagtctcggcagattgctgaccagg
tacctcaacatgcgagccttttcctgtggtatggacgatctgcgactcactcccgaagga
gagaaggcccgacgagaagcgcttgtacctgccaatacagtcggtctcaacgtcgcttcg
tcgtatgtctctctggagcagaaccctggtccccgtgatcccctgcttcttgagcgcctg
gaggaggttatgcgcgacgacagcaagcaggagggtctcgatcttctgatgaaggaaggt
ctcagtggtatcacggacaaggttcagacagcatgtgttcccaacggtctggaaaagcca
ttccccaagaaccagatgcaggccatgacaacatctggtgcaaagggatcccgagtcaac
gcatccctgatttcttgtaaccttggtcagcaagttttggaaggcagacgtgtgcctatc
atggtcagcggcaagtcgctgccatgcttcaacccattcgagactcatgctcgagctggc
ggttacatcgtgcagcgcttcttgactggcattcgtcctcaggaatattacttccatcac
atggctggccgagaaggtctgatcgatacagctgtcaagacgtccagatccggatatctg
cagagatgtgtcatcaagggcatggagggcctgaccgtcgcctacgatactaccgtgcga
gatgccgatggctctatgatccagttcctatatggagaggatggtcttgatgtgaccaag
caaaagtatctgaacgacttcagcttcattctggagaacgtcacttcccaggctgcccag
ctcaagtacgaccctagcatcggagatcggctcgggcagcaccgagaagtcatcgccaag
tacatgaagaaggccctcaagcatgtcaaggctcatgaccccaaggctcaggacccactc
tccagcatgttcaacccggcgaccactgcctttgctacctcggagaatttctaccaagcc
atgacctcctatctcaaggaaaacaaggacggtctggtgcgggacaagtcagacaagaag
aagctcgctctttctcgtgttagtctcaacaggaagaatgccgagatgctgtttgcgatg
aagtacctacgatctcttgtcgagcccggcgaggctgttggtatcgtggcaggccagtct
gttggtgagccttcaacacagatgacactgaacacgttccatttggctggtcactcggcc
aagaacgtcactctgggtattccgcgattgcgggaaattctcatgactgctagtgacaag
atttctacgccagccatgtccctttacccgattgatgagatgtccacggcggacgcggag
acatttgccaagtccatctcggtcctgcctctgggctacattctggatagcatctcagtc
gaggagaaggttggacgtggcaagatgtacggttccgccaaggtttaccgggttgacctc
aagtttttcgcctctgaagagtacacgaagacgtacgccatcagtgtctcggatgtcatg
gacgccgttgagcgaaagctgctccaccgtcttctttcttttgtgaagaaggacattaag
aagcgacagagtcagtctaccatggccacgcctgagatcggtgtcaaggccggcgtggtg
gaaacggcggcacctaatgccgaagccatccgggatgaggacgacgatgatgacgaaggc
gatgacgatgccacaaatgccaagcagcgggctaaccggaccgaggcggtatcctacggc
cccaacgacgacgacgatgatgctgttcagcaggagatggcacgtgacgctgctgatgat
atggacgaggacgaaggcatcggaagtagcccgcgtatggcccctgttgatgatgatgat
gatgaagatggcatcgactggtcagcaaaggcacgaaccgagcgcgtgctggattcatac
gccgaagtcacggactttacattcgacgcaaagagtggaaccgactgcagcttcaccctc
gagtttgactcgactatccccaaggtcctcatgctcaatctcgtgcaggaggccgtcaag
aagacggtggttcaggagatctccggcgtgggagcctgcacctttgtggaagagaagggc
gtccgcgtcattcacacggcgggagtgaacctacaggcgatgcaaaggtacagcgatttc
atcgacccccatcgaatccagaccaacgacattgcggccgtgctggcagtatacggtgtt
gaggcggctcgcagcaacatcgtccaggagctggctggtgtcttcggatcccacggcatc
aaggtcgacaaccgccacctgaacctgattggcgaccacatgacgaggaacggtggattc
acgccgttcaaccgaatgggtctgaagggcaacgtcagccccttcaccaagatgagtttc
gagacgacactatcgttcctcaaggatgccgtgctcgacggcgattgggatgacctcgcc
acgcccagcggtcggtcggtgatgggcaagcttggaaaggttgggacaggagggttcaat
gttttggcgcagcttcctacataccatgttgattctctggcgtaa
DBGET
integrated database retrieval system
