Fervidicoccus fontis: FFONT_1157
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Entry
FFONT_1157 CDS
T01936
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ffo
Fervidicoccus fontis
Brite
KEGG Orthology (KO) [BR:
ffo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ffo03016
]
FFONT_1157
Enzymes [BR:
ffo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
FFONT_1157
Transfer RNA biogenesis [BR:
ffo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
FFONT_1157
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AFH43145
UniProt:
I0A2D8
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Position
1103535..1104812
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AA seq
425 aa
AA seq
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MKFFIKTFGCALNRSDSELMREILISRGFEEIDNLENADVIIVNTCTVRKDSDQKAIEYI
EKVKQLNKNSKIVVAGCIPGSQPYLIKSRFPDAVLISPYETNRIVDAIFYETDFLGYEEF
KRYNVPIVKTGNIAIVPLNDGCLSNCNFCITKVARRRLLSRMPKVILKAIKDLVENGVYE
IQLSSQDASVYGIDFKGRPLLPDLVETINQEIKGEYMLRIAMMNPDGVKKDLENFVKIFE
YEHVFKFLHLPIQSGDDEVLKIMGRDYSIEDALYVVNEFRSRIKDLRIATDIIVGHPGES
EEAFENTLKVVVSGLFDRVHIAQYTPRPFTLSARMPQISDSVKKKRSSLLKEELEKVLNK
KMEKYVGKIIEGVVVEKDEKRESYIARTKNYISIVLKGGKKVSLGMKVNIEITDYTPYDL
RGIAL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttttataaagacttttggctgtgcgctaaataggagtgacagcgaattaatg
agagagatccttataagcagagggtttgaagaaatagacaacttagaaaatgctgatgtt
attatagtcaatacgtgtacagttagaaaagatagtgaccaaaaggcgattgaatatata
gaaaaagtgaaacagcttaacaagaattcaaaaatagtagtagctggttgtataccagga
agtcaaccgtatctaatcaaatcaagatttcctgatgcggttttaatttcaccgtatgaa
actaacaggatcgtcgatgctattttttacgaaacggacttcctaggctatgaagaattc
aagcgttataacgttccaatagtaaagacgggcaatattgctattgtacccctcaatgat
ggctgcctttctaactgtaacttttgtattacgaaggtagcaaggagaagacttttaagc
agaatgcctaaagtaatccttaaagcgataaaggatcttgttgaaaacggtgtttacgaa
atccagctttctagtcaggatgcttcagtttatgggattgattttaaagggagaccattg
ttaccagatttagttgaaacgatcaaccaagagattaaaggggaatacatgctaaggatc
gcgatgatgaatccggatggagtaaaaaaagatctagaaaatttcgtaaaaatttttgaa
tatgagcatgtatttaagttcttgcatttaccaatacaaagcggagacgatgaagttctg
aagatcatgggaagggactatagcatagaagatgctctatatgtagtaaatgaattcaga
agtagaattaaagacctgagaatagcaacagacattatagtcggtcatccaggggagagt
gaggaggcctttgaaaatacattgaaagtagttgtaagcggcttgttcgatagggtacat
atcgcacaatacacaccaagacctttcaccctatcagcgcgaatgcctcagatttctgat
tctgttaaaaagaagagaagcagtttacttaaggaggagctggagaaagtattgaataaa
aaaatggaaaaatatgttggtaagatcatagagggagttgtagtagaaaaagatgaaaaa
agagagagttatattgctaggacaaagaattacataagcattgtgctgaaaggaggaaaa
aaagtttctttagggatgaaagtaaacattgaaataactgattatacaccatatgactta
agaggaatagcgctctaa
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