Fulmarus glacialis (Northern fulmar): 104080872
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Entry
104080872 CDS
T08370
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga04010
MAPK signaling pathway
fga04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104080872 (CACNA1H)
04020 Calcium signaling pathway
104080872 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fga04040
]
104080872 (CACNA1H)
Ion channels [BR:
fga04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104080872 (CACNA1H)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
104080872
NCBI-ProteinID:
XP_009581702
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All DBs
Position
Unknown
AA seq
1341 aa
AA seq
DB search
LQDCPFCASLLEDPEFAFSESDSCDSDSNGIYEFTQDLRHGDHRDQLQQQRGRRRRKKKK
PKERNKVTRLWKAFGSKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEIS
NIVFTSMFALEMLLKLLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRL
LRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTG
DTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFN
LLVAILVEGFQAEGDANRSDTDEDKTSANFDDDFEKLKDLRATEMKMYSLAVTPNGHLEG
RGSLPPPIIMRTAATPMPTPKCSPHMDSVHTFVDSRRGSNASLDPLSYDQKSLSSLRSSP
CANWGTSSNWGSRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTVS
RPSLHRQAESLDYRSSLDLPELLQLPTMRHSLSISPMAVLPAEYQDCNGKMVHVPSEFFL
RVDNHKEDAMDYEDDMEDSYCYRIRKVLEPYKPQWCKSHEDWSLYLFSPQNRFRVMCQKV
IAHKMFDHVVLVFIFLNCITIALERPDIDPHSTERIFLSVSNYIFTAIFVAEMMVKVVAL
GFFSGENTYLQSSWNVLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVI
SRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTK
TDCANARYKWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPW
MLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEI
YLSEAQRRPYYADYSPARKYIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEAL
KYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNAALPI
NPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVE
LFGKLDCSEENPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCL
SYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGAT
TSATSGSRGGAAAPESRAPYRSQESMKPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVMP
AKAPFPLHEVEMETYPCKSQRGSITSIRSQPVGTCSSLRVPAESLQLAVRSPNQEGRHRW
KILPPNITPRSPTLNKLLCRQ
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
ctgcaggactgtcccttctgcgccagccttctggaagaccctgagtttgccttcagcgag
tccgacagctgcgactctgacagcaatggcatctacgagttcacccaggacctgcggcat
ggcgaccacagagaccaactccagcagcagcggggcaggaggaggaggaagaagaaaaaa
cccaaggagaggaataaggtcacccgcctgtggaaggctttcggcagcaagctgaagagg
atcgtggagagcaagtacttcaaccgggggattatgatagccattctcatcaacacactg
agcatgggcattgagtaccacgagcagccggacgagttgaccaacgccttggagatcagt
aacattgtcttcacaagcatgtttgccctggagatgctcctgaaactccttgcctttggc
ctcttcggctacatcaagaacccgtacaacatctttgacgggatcatagttgtcatcagt
gtctgggagatcatcggccagtcggacggaggcctctctgtgctacgaacttttcggctg
ctccgggtgctgaaactggtacgtttcatgcccgccctccgtcgccagctggtggttctg
atgaagacaatggacaatgtagccaccttctgcatgttgctcatgctcttcatctttatc
ttcagcattctcggaatgcatctttttggatgcaagttcagcctgaaaactgatacggga
gacacagttccagatagaaagaattttgattccttactttgggccattgtgaccgtattt
cagatcctcactcaagaggactggaacgtggtactgtacaatgggatggcatctacatca
tcatgggcagcactctactttgtggccctgatgaccttcggcaattatgtgctcttcaac
cttcttgttgccattttggtggaaggcttccaggcagagggtgatgccaataggtcagac
acagatgaggacaagacatctgccaacttcgatgatgattttgagaagctaaaagacctc
cgagcaacagagatgaagatgtactcccttgccgtcaccccaaatggacacctggagggc
aggggaagcctgccacctcctataatcatgcgcactgctgccacaccaatgcccacaccg
aagtgttccccacacatggattcagtgcacacttttgtggactcgaggagagggagtaac
gcttcgctagaccccttgagctatgatcagaagtccttgtccagcctccgcagttcccct
tgcgccaactggggcaccagcagcaactggggaagccgacgctcaagctggaatagcctg
ggcagagccccgagccttaagaagaagaaccagtcaggagaaagagagtccttgctctcc
ggggaggggaaaggcagcacagacgatgactctgacgacgccaagtctagcacggtcagc
aggccctcgttgcaccgccaggcagagtccctggactaccgcagctccctggacctgcct
gagctgctccagttgcccaccatgcgccactcgctcagtatcagccccatggccgttctg
cctgctgagtaccaagactgcaatggcaagatggttcacgtccccagcgagtttttcctg
cgtgtcgacaaccacaaggaggatgccatggactatgaggatgatatggaggatagttac
tgctaccgaattcgtaaagtcctggagccctacaaaccacagtggtgcaagagtcatgaa
gactggtccctctacttgttttccccacagaatcggttccgagtgatgtgccagaaggtc
attgcccacaaaatgttcgatcacgtggtgcttgtcttcatatttctcaactgcatcact
atagcactggagcgaccagacatagacccacacagcacggaaaggatatttctaagtgtt
tctaattacatcttcacagcaatctttgtggctgaaatgatggttaaggtggtagctctt
ggctttttttctggggagaacacgtatctgcagagcagctggaacgtcctggatggagtc
ctggtctttgtatctatcattgacataattgtctccatggcatcggcaggcggagctaag
atcctgggtgtccttcgtgttttgaggcttctgcggaccttgagacctctccgagtcatc
agcagagccccaggtctgaagctggtggtagaaactttgatctcctccttgaggcctatt
gggaatattgttctcatctgctgtgctttcttcattatctttgggattttaggggtccag
ctttttaaaggcaagttctactactgtgatggtcctgatgtaaaaaacatcactacgaag
actgactgcgctaacgcacgttacaaatgggttcggcggaagtacaattttgacaatttg
ggacaggccctcatgtccttgtttgtcctctcctccaaagatggctgggtgaacatcatg
tacgatggtttggatgccgtgggtattgaccaacagcccatccagaaccataacccttgg
atgcttctctacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttt
gtgggggtggtggtggagaactttcacaagtgccgacagcaccaggaggcggaggaggcc
cggcgtcgggaggagaagcggctgagacgcttggagaaaaagcgcaggagtaaggagata
tacctgtctgaagcccagcgcaggccttactatgctgactattccccagcgcggaagtac
attcacaccctctgcaccagccactatcttgacctcttcatcacgttcatcattggggtc
aatgtcatcactatgtcaatggagcactacaaccagccaaagtccctggatgaagccctg
aagtactgcaactatgtgttcaccatagtttttgtgttcgaggcagttctgaagttggtg
gcatttggttttcggaggttctttaaggacaggtggaatcagctggatttggccatagtt
ctcttatcaattgtgggaatcacactggaggaaattgagatgaatgctgcattgcccatc
aatcccacgataatacgcatcatgcgggtgctgagaatagcaagagtgctgaaactgctt
aaaatggccaccgggatgcgagctctcctggacacagtggtacaagcccttccccaggta
gggaaccttggcctactttttatgctcctgttttttatctatgctgccctgggagtggaa
ctgtttggcaagctggactgcagtgaggaaaatccttgtgaaggtctgagccggcacgcg
actttcaccaactttggcatggcctttctcaccctcttcagggtgtcaacgggggacaac
tggaatggtatcatgaaggacactctccgggaatgcactcgggaagacaagcactgcctc
agttacctgcctgttatctcccctgtctacttcgtcaccttcgtcctcatcgcacagttc
gtcctagtcaacgtagtggtggcagtgctgatgaagcacttggaggagagcaacaaggag
gccaaggaggatgctgagatggatgctgagattgagttggagatgtccagaggagcaacc
acctcggccaccagtgggagcaggggaggtgcagcggccccggagagcagggcaccctac
agaagtcaggagagcatgaagccacaggactctcaaaacctgctgacggtccgcaagatc
tccgtttcccgtatgcactccttgcccaacgacagctacatgttccggccggtgatgcca
gcgaaagcccctttccccctccacgaggtggagatggaaacgtatccctgcaaatctcaa
agagggtccatcacctccatccgctcccagcccgtgggaacgtgttcctctctgagagtc
ccagcggagtccctgcagctggcagtccgttctcccaaccaggaaggccgtcaccgctgg
aagatccttccccccaacatcacacctcgatctcctactctcaacaagctgctgtgcaga
cag
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