Fusobacterium gonidiaformans: C4N16_03410
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Entry
C4N16_03410 CDS
T05460
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
fgo
Fusobacterium gonidiaformans
Pathway
fgo03030
DNA replication
fgo03430
Mismatch repair
fgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4N16_03410 (polC)
03430 Mismatch repair
C4N16_03410 (polC)
03440 Homologous recombination
C4N16_03410 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fgo03032
]
C4N16_03410 (polC)
03400 DNA repair and recombination proteins [BR:
fgo03400
]
C4N16_03410 (polC)
Enzymes [BR:
fgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4N16_03410 (polC)
DNA replication proteins [BR:
fgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4N16_03410 (polC)
DNA repair and recombination proteins [BR:
fgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4N16_03410 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
DEDDh_C
DNA_pol3_a_NI
HHH_3
tRNA_anti-codon
DUF655
RNase_H_2
YhfH
Motif
Other DBs
NCBI-ProteinID:
AVQ16634
LinkDB
All DBs
Position
627293..631645
Genome browser
AA seq
1450 aa
AA seq
DB search
MSSKEIRMKPGRELLQRLGIQFMQLEEIRYSERRNVLRVFCVLPTYLAISELERLHQDLQ
ITFGNNVKIEFSSKLLDENIPKEELKNIVDLAIQRLRKTEPRFKSFLCNYRIFIEGNDIY
LEVNTDCGIEIIEDGHGSQKLEAVLYEYGLKYYSIHIERGDFTAENLHRERERKEEIRQI
EKKAIQEQNEIAAKAAAKVPTIPEKTDFPKRGNGGFSRNKTREIKGSPIPMKDFAEVMEE
DTCIVEGEIFSLEDRELSTGNILKTLWITDESNSLTAKLFLKKDEVLEIAKNDYVRIEGK
VQIDTYAQNEKIIMIQAINRLERKKTKKEDLAEEKMVELHTHTKMSEMVGVTEVGDIIKR
AKQYGHSAVAITDYGVVHSFPGAHKAAKEAGIKAILGCEAYMIDDTLPIVHNLKEDQDLE
KASFVVYDLETLGFNSHEGKIIEIGAVKIVEKRIVDRFSQLVNPGQSIPQNIVDVTNITD
SMVQNEPNIEEVLPKFLDFIEGSILVAHNADFDIGYLKQQCKQQGYSDFNPSFIDTLQMA
KDLYPELKQFGLGPLNKKLGLSLENHHRAVDDCQATGNMFLIFLDKYLDQGIHKLSEMQG
AFPVNTKKQNTRNVMLLVKDRVGLENLNRLVSDAHLYHFGNRKPRVLKSNLEKYREGLIV
GCSLTGHSINDSDLFHDYSTGNMERIPEKISFYDYIELLPRQAYTENIEYNGTGLISGNS
YIEKMNQYFYDLAKEKGILVTGSSNVHYLDPEEAKIRTILLYGSGMVHGAKAYKTDNGFY
FRTTGELLEEFSYLGEEAAKEILIQNTNAIAEKIEVIKPIPDGFYPPSIDNAEETVREMT
YEKAYRIYGNPLPEIVEKRLERELNAIIGNGFSVLYLSAQKLVKKSLDNGYLVGSRGSVG
SSLVAFMMGITEVNALYPHYICTNPDCKHVEFIEREGVGIDLPEKKCPKCGQMYKRDGYS
IPFEVFMGFNGDKVPDIDLNFSGEYQSEIHRYCEELFGKENVFKAGTISTLAEKNAAGYV
KKYFEDNGMSISQAEVMRLAKKCEGAKKTTGQHPGGMVVVPSDHTIFEFCPVQKPANDEN
SDSITTHYDYHVMDEQLVKLDILGHDDPTTIKLLQEYTGLDIYGIPLSDPDTLKIFSSTE
SLGVTPQQIGSEVATFGIPEFGTPFVRQMLLDTRPTTFAELVRISGLSHGTDVWLNNAQE
FIRQKQATLSEVITVRDDIMNYLIDQGIEKGTAFKIMEFVRKGKPSKDPEGWKKYSDLMK
EKHVKDWYIESCRRIKYMFPKGHAVAYVMMAIRIAYFKVHYPLAFYAAYLSRKAEDFNFE
TLGTPEKARIRLEELSKEGKLDVKKKAEQALCEVMIEMEARHIELLPIDLYHSAGKKFLI
QGDKIRVPLIALAGLGGAVIDNILEERQKESFISIEDFKKRTKVSQTIVEKMKDLKIIEN
MNETNQISLF
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtaaagaaatcaggatgaagcctggaagagagttactacaaagactaggaatt
caattcatgcagttagaggaaattcgttattcggaacgaagaaatgtactgcgtgttttt
tgtgttcttccgacttatcttgcgatttctgagttagaaagattgcatcaagatttacag
attacttttggaaacaatgtaaaaatagagtttagttctaagcttttagatgaaaatatt
cccaaagaagaattgaaaaatattgtagatttggcaattcaacgactccgaaaaacagag
ccgagatttaaatcatttttatgcaattatagaatttttattgaaggaaatgatatttat
ttagaagtgaatacggattgtggaattgaaattatcgaagatgggcatggaagccaaaaa
ttagaggcagtgctttatgaatatggtttaaagtactattctatacatatcgaaagggga
gatttcacagccgaaaatctacatcgagaaagagaaagaaaagaagaaattcgacaaata
gagaaaaaagcaattcaggaacaaaatgaaattgcagcgaaagctgctgccaaagttcca
acaataccggagaaaacggattttccaaaacgtgggaatggaggtttttccagaaataaa
acaagagaaatcaaagggagtcctattcctatgaaagattttgcagaggttatggaagag
gatacttgtattgtagaaggagaaattttctctttagaggatagagaattatcgacagga
aatattctaaaaaccttatggattacggatgaaagtaattctttgactgccaagcttttt
ctaaagaaagacgaagtcttggaaattgcaaaaaacgattatgtcagaattgagggaaag
gtccaaattgatacctatgctcaaaacgaaaaaatcatcatgatacaagcaatcaatcgt
ttagaacgaaagaaaacgaaaaaagaagatttggcagaagaaaaaatggtagagcttcac
acacatacaaaaatgagtgaaatggtcggagtaacagaagttggagacattataaaaaga
gcaaaacaatacggacattctgctgtagccattacggattatggagtggtccattctttc
ccgggagctcataaagcagccaaagaagcaggaatcaaagcaattttaggttgtgaggcc
tatatgatagatgatactttaccaatcgtccataatttgaaagaggaccaagacttggaa
aaggcaagttttgtagtttatgacttggaaaccttaggtttcaattctcatgagggaaaa
attattgaaattggagctgtcaaaattgtagaaaaaagaattgtggatcgtttttcacaa
ctggtgaatcccgggcaaagtattccacaaaatatcgtggatgtaacaaatattacagac
agtatggtacaaaatgaaccgaacattgaagaagtgctccctaagtttttagactttatt
gagggaagtattctcgtagctcacaatgctgattttgacatcggttatttgaaacaacaa
tgtaaacaacagggatattcagatttcaatcctagctttattgatactttacaaatggcg
aaggatctttatccggaattgaagcaattcggattgggacctttgaataagaaattaggc
ttatctttggagaatcaccatagagcggtagatgactgtcaagcaacgggaaatatgttc
ttaattttcttagataaatatttagatcaaggaattcataaattatcagaaatgcaggga
gcttttcctgtgaatacgaaaaagcaaaatacgagaaatgttatgttattggtgaaagat
agagtggggcttgaaaacttaaatcgtttggtttcggatgctcatctttatcattttggg
aatcgaaaaccaagagttttgaaatcaaacttagaaaaatatcgagaaggattgatagta
ggttgttctttgacgggacattctatcaatgatagtgatttgtttcatgattactcgaca
ggaaatatggaaagaatccctgaaaaaatatccttttatgactatatagaactattaccg
agacaggcttatacagagaatatagagtacaatggaacgggactcatttccggaaatagc
tatattgagaaaatgaatcaatatttttatgacttggcaaaagaaaaagggattttggtg
acaggaagttccaatgtgcattatttagatccggaagaagcaaagataagaacaatttta
ctctatggaagtggaatggtccatggagcgaaggcgtacaagaccgataatggtttctat
ttccgtacgactggagaattattagaggaattttcttatttaggagaagaagctgccaag
gaaattctgattcaaaatacgaatgcaattgcagaaaaaattgaagtgataaaaccaatt
ccggacggtttttatccgccatcgattgacaatgcagaggaaacagtacgagagatgacc
tatgaaaaggcgtatcgtatctatggcaatcctttacctgaaattgtagaaaagagattg
gagagagaattaaatgcgattattggaaatggattttcggtattgtatctttccgctcaa
aaattagtaaagaaatctttggataatggttatttggttggttctcggggatcggtaggt
tcttctttggttgcttttatgatgggaattacggaagtaaatgctttgtatcctcactat
atttgtacgaatccggattgtaagcatgtggagtttattgaaagagaaggggtagggatt
gacttaccggaaaagaaatgtccaaagtgtggacaaatgtataaacgagacggatattcc
attccttttgaagtgttcatgggattcaatggagataaggttccggatattgatttgaac
ttctccggagaatatcaatcggaaattcatcgatattgtgaagaactttttggaaaagag
aatgtctttaaggcaggaacgatttctaccttagcagaaaaaaatgctgccggttatgta
aaaaaatattttgaagacaatggaatgagtatcagccaagcagaagttatgcgacttgct
aagaaatgtgagggagcaaaaaagacaacagggcaacatccgggaggaatggttgtcgtt
ccttcggatcatactatttttgaattttgtccggtgcaaaaaccggcgaatgatgaaaac
agcgattcgattaccactcactatgattatcatgttatggacgaacagttagtaaaattg
gatattctgggacatgacgatccgacaacgataaaattactacaagaatatacaggcttg
gatatttatggaattcctttatcggatccggatactttaaagatattctccagtacagaa
tctttaggggtgactcctcaacaaatcggctccgaagtagcaacctttggaattccggaa
tttggaactccttttgtaagacaaatgttattagataccagaccgacaacttttgcagag
cttgttagaatttccggtctatctcatggaacggacgtttggttaaacaatgctcaagag
tttattcgacaaaaacaagcgacactttcggaagttatcacagtgcgggatgacattatg
aactatttgattgaccaaggcatcgagaaagggactgcttttaaaattatggaatttgtc
cgaaagggaaaaccaagtaaggatcctgagggatggaagaaatattcggatttgatgaaa
gaaaaacatgtcaaagattggtatattgaatcttgtcgtagaatcaaatatatgtttcca
aaaggacatgcggttgcctatgttatgatggcaattcggattgcatattttaaagtacac
tatcctttggcattctatgcagcttatttgtcgagaaaggcggaagattttaattttgaa
actttgggaactcctgaaaaagcgagaattcgtttagaagaattgtcaaaagaaggaaaa
ttggacgtaaagaaaaaggcggagcaagctctttgtgaagtgatgatagaaatggaagca
aggcatatagagctgttgccaattgatttataccattctgctggaaaaaaattcttgatt
caaggagataaaatccgagttcctttgattgctttagccggattgggtggagccgttatt
gataatattttagaggaaagacaaaaagaaagttttatttcgattgaagattttaagaaa
aggacaaaagtttctcagaccattgtggaaaaaatgaaagatttaaaaattatagaaaat
atgaatgaaacgaatcaaatttcgttgttttaa
DBGET
integrated database retrieval system
