Allofrancisella guangzhouensis: SD28_06380
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Entry
SD28_06380 CDS
T03527
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
fgu
Allofrancisella guangzhouensis
Pathway
fgu00310
Lysine degradation
fgu01100
Metabolic pathways
fgu01110
Biosynthesis of secondary metabolites
fgu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
fgu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SD28_06380
Enzymes [BR:
fgu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SD28_06380
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJC49281
UniProt:
A0A0A8EAS3
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All DBs
Position
complement(1358402..1360537)
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AA seq
711 aa
AA seq
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MKTIVFVYKNNLKSYKENFLLKIKKDLEAYKYYTLVGDDMDEVVEILEENSRICCIVLDR
ASFNIDAFHDIAHLNTKLPIFVVSDYNHSIKLNLKDFNLNINFLQYDALAGEDADFINKT
IINYFNDILPPFTYELFEYSKSFNSSFCTPGHQGGYGFQRSAVGALFYDFFGENVFKTDL
SISVKELGSLLDHSDAHKDAEEYISKVFKSDRSLIVTNGTSTANKIVGMYSVADGDTILV
DRNCHKSVTHLMMMVDVNPVYLKPTRNAYGIIGGIPQEEFKKKAIQKKIQESKVADKWPE
YAVITNSTYDGILYNTDTIHNELDVKKLHFDSAWIPYAIFHPIYKHKSAMQVDPKPECVI
FETQSTHKLLAAFSQSSMLHIKGDYNEEVLNEAFMMHTSTSPFYPIVASTEIAAAMMDGE
QGYNLIDKTINLAIDFRKELVKLKFEAQGWFFDVWQPDDISSKETWALRNTDGWHGFKDI
EGDFLSLDPLKITILTPGIKDNEVQDWGIPADVVAKFLDEHDIVVEKAGPYSLLFIFGLG
TTKAKSVRLISVLNKFKQMYDENALVEKMLPALYAEDPKFYEDKRIKEISEQLHNYIYEA
NLPTLMYHAFNTLPEQQINPHRAFQKLLKGKVKKVPLAELYGQVSAVMILPYPPGIPVIF
PGEKITADSKVILDFLLMLEKIGSMLPGFDTDIHGPERSKDGKLYIKVINE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatagtctttgtctataaaaacaatctaaaatcatataaagaaaatttcctt
ttaaaaataaaaaaagatctggaggcatataaatactatactctagttggcgatgatatg
gatgaagttgtcgaaattttggaggaaaattcaaggatatgttgtatagttttagatagg
gctagttttaatatagatgctttccatgatatagcgcacttaaatacaaaattacctata
tttgtagtttctgattataaccacagtatcaaactcaatctaaaagattttaatttaaat
attaactttttacagtacgatgctttagctggtgaagatgctgattttattaataaaact
ataattaattattttaatgatattttaccaccttttacgtatgagttgtttgagtattct
aagtcttttaactcttcattttgcactccaggacaccaaggaggctatggttttcaaaga
tcagcagtaggcgcattattttatgatttttttggggaaaatgtgtttaaaacagacctt
tcaatttccgtaaaagaacttgggagtttacttgatcactctgatgctcataaagacgct
gaagagtatatatcaaaagttttcaaatctgatagatctttgatagttacaaatggtact
tcaacagcaaataaaatagttggcatgtacagcgtcgcagatggtgatactattttggtt
gatagaaactgtcacaaatcagtaacacacttgatgatgatggttgatgttaatccagta
tatttaaagccaactagaaatgcttatggaattataggaggtatcccacaagaagagttt
aaaaaaaaggctatacagaaaaaaatacaggaaagtaaagttgcagataaatggccagaa
tatgcggttataacaaactcaacctatgatggtatcttatacaatacagatacaatccat
aatgaattagatgtcaaaaaattacattttgatagtgcatggataccatatgctatattt
catcctatttataagcataaatcagcaatgcaagttgatcctaaacctgagtgtgttatt
tttgagactcaatcaactcataagcttctagcagcattcagtcagtcttcaatgttacat
ataaaaggtgattataacgaagaagtacttaatgaagcttttatgatgcatacatcaact
tcgccgttttatccaatagttgcaagtactgaaatagctgctgctatgatggacggtgaa
caaggatataatttaatagataaaactattaatttagcaatagattttagaaaagaatta
gtcaaactaaaatttgaagctcaaggatggttttttgatgtttggcaaccggacgatatt
tcaagcaaagaaacttgggcattacggaatacggatggttggcatgggtttaaagatata
gaaggtgattttctatcacttgaccctctaaaaataactatattaactccagggataaaa
gataacgaggtacaagattggggaataccagcagatgtcgttgctaagtttttagatgaa
catgatattgtagttgaaaaggcagggccatactctttactatttatatttggtttgggg
acaacaaaagcaaaatcagtaagacttatatctgtattaaataagtttaagcagatgtat
gacgaaaatgctttagtagaaaagatgttgccagctttgtatgcagaagatccaaagttt
tatgaggataagagaataaaagaaattagtgagcaattacataactatatatacgaagca
aatctacccactcttatgtatcatgcttttaatacgcttcctgaacagcagataaatcca
catagagcgttccagaagttacttaaaggtaaggttaaaaaggttccattagcagaatta
tatggtcaagtttctgctgttatgatattgccgtacccaccaggaataccggtgatcttt
cctggtgagaaaattacagctgattcaaaggtaattttagattttttattaatgttggaa
aagataggatctatgctgcctggatttgacacagatatacacggtccagaaaggtctaaa
gatggtaagctttatataaaagtaattaatgaatag
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