Flavobacterium keumense: MG292_07250
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Entry
MG292_07250 CDS
T09003
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fke
Flavobacterium keumense
Brite
KEGG Orthology (KO) [BR:
fke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fke03009
]
MG292_07250 (rimO)
Enzymes [BR:
fke01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MG292_07250 (rimO)
Ribosome biogenesis [BR:
fke03009
]
Prokaryotic type
ribosomal protein modification factors
MG292_07250 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WGK93884
LinkDB
All DBs
Position
complement(1616049..1617362)
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AA seq
437 aa
AA seq
DB search
MRTKSLKKNKINVITLGCSKNIYDSEVLMGQLRASGKEVEHEAPEAEEGNIIVINTCGFI
DNAKAESVNMILEYADKKERGLVDKVFVTGCLSERYRPDLEKEIPNVDQFFGTTELPQLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHVSQPIEKLVKEA
EGLAKDGVKELILIAQDLTYYGLDIYKKRNLAELLEALVKVEGIEWIRLHYAFPTGFPMD
VLEVMKREPKICNYIDIPLQHISDSILKSMKRGTTQAKTTQLLKDFRAAVPGIAIRTTLI
VGYPGETKEDFEILKEFVQEMKFDRMGCFAYSHEENTSAYLLEDDVPDTVKQERANEIME
LQSQISWDLNQEKVGQTFKCIIDRKEGGHFVGRTEYDSPDVDNEVLIDATQHYLKTGEFV
TIKIIEATEFDLYGEPI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgaagtctttaaagaaaaataaaatcaatgtaattaccctaggatgttctaaa
aacatctacgatagtgaagttttaatggggcaacttcgtgccagcggcaaagaagtagaa
cacgaagcacctgaagctgaagaaggcaacattattgtaattaacacctgtggttttatt
gataatgcaaaagcggaatcagtgaatatgattttagaatatgctgataaaaaagaacgt
ggattagtagataaagtttttgtaaccggatgtttatcggaacgttacagacccgattta
gaaaaagagattccgaatgtagatcagttttttggcaccaccgaattaccgcaactttta
aaagctttaggggcagattataagcatgaattattaggtgaacgtttaactaccacgcca
aaaaattatgcttatttaaaaatagctgagggttgtgatagaccttgtagtttttgtgct
attccgttaatgagaggaaaacacgtttcacaacctattgaaaaattggttaaagaagcc
gaaggtttagctaaagacggagtgaaagaattgattttaattgcccaagacttaacatat
tatggccttgacatttacaaaaaaagaaatctagccgagttattagaagctctagtaaaa
gtggaaggaattgaatggattcgtttgcattatgcctttcctactggatttccaatggat
gttttagaggtaatgaagcgtgaaccaaagatttgtaattatatcgatattccgttgcaa
cacatttctgattctattttaaaatctatgaaacggggaacgactcaagccaaaacaact
cagttgttgaaagattttagagcagcagttcctggtatagctatcagaactactttgatt
gttggctatcctggagaaactaaagaagattttgaaatcttaaaagaatttgttcaggaa
atgaaatttgacagaatgggatgttttgcctattcacatgaagaaaatacttcggcctat
ctattggaagatgatgttccagatactgtaaaacaagaacgcgcgaatgaaattatggaa
ttgcaatcgcaaatttcttgggatttgaaccaagaaaaagtaggtcaaactttcaaatgc
atcattgaccgaaaagaaggtggacactttgttggtcgtactgaatatgatagccctgat
gttgacaatgaagtcctaattgacgctactcaacactatctaaaaacaggagagtttgtc
actatcaaaatcatcgaagcaaccgaatttgatttgtatggtgaacccatataa
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