Candidatus Fluviicola riflensis: CHH17_04015
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Entry
CHH17_04015 CDS
T05019
Name
(GenBank) hypothetical protein
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
flu
Candidatus Fluviicola riflensis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flu02000
]
CHH17_04015
01504 Antimicrobial resistance genes [BR:
flu01504
]
CHH17_04015
Transporters [BR:
flu02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CHH17_04015
Antimicrobial resistance genes [BR:
flu01504
]
Gene variants
Tetracycline resistance genes
Transporters
CHH17_04015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_3
Motif
Other DBs
NCBI-ProteinID:
ASS47918
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All DBs
Position
944169..945440
Genome browser
AA seq
423 aa
AA seq
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MTTQQFSKNALIFVLITICLDSIGLGIIIPSLPDLVAETAHVSKDASTNYYSLILIMYAF
MQFLFSPLVGNLSDRFGRRPILLMSVCGLGIDYIFMCFAPDIWWLVVGRGLAGMFGASFT
TAAAYIADISTDENRAQNFGMIGAAFGVGFIVGPAIGGLVATWGLRAPFAIAAVLSLVNF
VYGLLVLKESLPADQRRKFDWKRANPLGAIKQIRRYAANKYLFLVMFLVLFSNMAVHALW
NYYTDKKFGWDKLDVGISLAVVGVCIGVVQGGFSGKIVRKLGEKGAATLGMVVLFLVTAG
IGLIPYGWMMYAIIIPYALSGIIDPSIRSIVSAQTESNEQGELQGIFTSMMSFAEIIGPL
LMLWIYGKTLKLGDANPIFYGTAFYVAAGIVLIGFFLMRWAFTKRTVKKGELVPEEELVD
QEY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacagcaattttccaaaaacgcactcatttttgtactcatcactatttgcctg
gattccatcgggttgggaattatcattccatccttacccgatctggtagccgaaacggca
catgtgagtaaagacgcttcaaccaattattacagtttgattctgatcatgtatgcgttc
atgcaatttttgttttcaccgctggtgggcaatctgagtgatcgttttggaagacggccg
attctgttgatgtcagtttgtggtttgggaatcgattacatcttcatgtgtttcgcccct
gatatctggtggttggtggttggccgcggtttggccggaatgtttggtgcaagtttcacg
acagcagcagcgtatattgctgatatttccactgatgaaaaccgtgcgcaaaatttcgga
atgattggtgccgcttttggtgtcggatttattgtaggacctgccatcggtggtttggta
gcaacctggggactgagagctccgtttgccattgccgccgtattatcattggtcaatttc
gtatacggattattggttttgaaggaatctttacctgctgatcaacgtcgtaaatttgac
tggaaacgggcaaatccgctcggagcgatcaagcaaatccgtcgttacgcagccaataaa
tacttgttcctggtcatgttcctggtgttgttttccaatatggccgttcacgcgctgtgg
aattattacactgacaaaaagtttggttgggataaattggatgtaggaatttcccttgcc
gttgttggtgtttgcatcggagtagtacaaggcggtttttcaggtaaaattgtgagaaaa
ctgggtgaaaaaggcgctgcaactctcggtatggtggtgttgtttttagtaacagccggg
attgggctcataccctatggctggatgatgtacgcgatcattattccgtatgcactttca
ggaattattgatccaagtatccggtctatcgtttctgcccaaaccgaaagcaatgaacaa
ggagaattacagggcatttttaccagtatgatgagcttcgctgaaattatcggtccgctc
ttgatgctttggatttacggtaaaacattgaaacttggcgatgcgaatccgattttctat
ggcacagcgttctatgtcgccgcaggaattgtactgatcggcttcttccttatgagatgg
gcgtttaccaaacgaacagtcaaaaaaggtgaattggttcctgaggaagaattggttgac
caggaatattaa
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