Candidatus Fluviicola riflensis: CHH17_15555
Help
Entry
CHH17_15555 CDS
T05019
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00540
Lipopolysaccharide biosynthesis
flu01100
Metabolic pathways
flu01250
Biosynthesis of nucleotide sugars
Module
flu_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CHH17_15555 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
flu01005
]
CHH17_15555 (rfaD)
Enzymes [BR:
flu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CHH17_15555 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
flu01005
]
Core region
CHH17_15555 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Ldh_1_N
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
ASS50115
LinkDB
All DBs
Position
complement(3613143..3614108)
Genome browser
AA seq
321 aa
AA seq
DB search
MIVITGAAGFIGSCLVSELNNNGITDLVLVDDFTKSEKSDNLKGKYYTELVERSVFDQWF
QSNGEKVSFVYHIGARTDTTEFDKAIFDELNVDYSKMIWKHCVAFNIPLVYASSGATYGL
GEIGYDDNEATIPQLQPLNPYGWSKQWFDIWALEQTATPPFWAGLKFFNVYGPNEYHKGR
MASVIFHAFNQIQATGGMKLFRSHNPNYDDGGQMRDFVYVKDVVSVCQFLREGKAKSGIY
NLGSGVARPFLDLAVNTFKALGKEPNISFIDTPEDIRDKYQYFTEANMAKLISQGYDKPF
HSLEEGVTDYVKNYLLEHKYF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaattacaggagcagcaggttttatcgggagttgtttggtgagtgaactcaac
aacaacggaatcacggatttggtattggtggatgattttaccaaatctgaaaagtctgat
aatcttaaaggaaaatactatactgagcttgttgaacgttccgttttcgatcaatggttt
cagtccaatggagaaaaagtctcgtttgtttaccacattggcgcacgcaccgataccacc
gaattcgacaaagccatttttgatgaactgaacgttgattattccaaaatgatctggaaa
cactgcgtggcattcaatattccactggtgtatgcaagttcaggcgctacatatggtttg
ggcgaaatcggttacgacgataacgaggcaactattccacaattgcaaccgctcaatcct
tacggctggtcgaaacaatggtttgatatctgggcattggaacaaacggcgacaccgcct
ttttgggctggtttgaagttcttcaatgtttatggcccaaatgaatatcacaaaggacga
atggcgtcggtgatctttcatgcgttcaatcaaattcaggcgacgggcggtatgaaattg
ttccgttctcacaatcccaattacgacgatggtggacaaatgcgcgatttcgtgtatgta
aaagacgtggtttcggtgtgccagttcctacgcgaaggaaaggcaaaatcgggcatttac
aaccttggttcgggagttgcacggccgtttcttgatttagcagtaaatacattcaaagca
cttggcaaagagccgaatatttcgttcatcgatacaccggaagatattcgggataaatac
cagtatttcaccgaagcgaatatggcaaaactcatttctcaaggttatgacaaaccgttt
cattcgctggaagaaggtgtaacggattatgtgaaaaactacctgttagagcacaagtac
ttttag
DBGET
integrated database retrieval system
