Candidatus Fluviicola riflensis: CHH17_18855
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Entry
CHH17_18855 CDS
T05019
Name
(GenBank) CMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
flu
Candidatus Fluviicola riflensis
Pathway
flu00240
Pyrimidine metabolism
flu01100
Metabolic pathways
flu01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
flu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CHH17_18855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
flu02044
]
CHH17_18855
Enzymes [BR:
flu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
CHH17_18855
Secretion system [BR:
flu02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
CHH17_18855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
NAD1
APOBEC2
APOBEC3
APOBEC4_like
APOBEC4
APOBEC1
Motif
Other DBs
NCBI-ProteinID:
ASS50747
LinkDB
All DBs
Position
complement(4401306..4401770)
Genome browser
AA seq
154 aa
AA seq
DB search
MSEIESVSTQTKLERYDKAYLRMASTWAQLSHCCRKKVGAIIVRDGMIISDGYNGTPAGF
DNSCENDDGETHWYVLHAEANAILKVARSTNDCRNATLYLTLSPCKDCSKLVLQAGICRV
VYSQEYKDTAGIDFLKNAGVEVVHIPDPFDDVEI
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaattgaatccgtttccacacaaacaaaactcgaacgatacgataaagcctat
ttgcgtatggcaagcacttgggcgcaattgtcgcactgctgccgcaaaaaagtaggcgcg
attatcgtgcgtgatggtatgattatttcggatggttacaacggcacgccggcaggtttt
gataacagctgtgagaatgacgatggcgaaacgcattggtatgtgcttcacgctgaggcg
aatgcgatattaaaagtagcccggtcgacgaacgattgccggaatgccacactttatctg
acactttcaccttgtaaagattgcagtaaactggtcttgcaggcaggaatttgccgggta
gtatattcacaagaatacaaagacaccgccggaatcgatttcctgaagaatgcaggtgtt
gaagttgttcatattccagacccttttgacgatgttgaaatctaa
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