Flavihumibacter rivuli: KJS94_06490
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Entry
KJS94_06490 CDS
T08011
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
flv
Flavihumibacter rivuli
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
flv03009
]
KJS94_06490 (rimO)
Enzymes [BR:
flv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KJS94_06490 (rimO)
Ribosome biogenesis [BR:
flv03009
]
Prokaryotic type
ribosomal protein modification factors
KJS94_06490 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
NARF
Motif
Other DBs
NCBI-ProteinID:
ULQ57845
LinkDB
All DBs
Position
complement(1470931..1472247)
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AA seq
438 aa
AA seq
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MKARTLKENKVNIITLGCSKNMVDSEVLSGQLQANDIAVVHENAKLDHNIVVVNTCGFID
KAKEESINTILDQVALKQKGRLDKVYVTGCLSQRYRDDLEKEIPEVDAWFGTMELPLILK
ELQADYKAELLGERMLATPKHYAYMKISEGCNRTCSFCAIPLMRGGHVSRPIDDLVREAE
GLVQKGVKEVMLIAQELTYYGLDLYKKRQLAELMNRLADVKGLEWIRLHYAYPSKFPLDI
LDVMRERPNICNYLDMPLQHASNNMLKAMKRQITREEMEDLVAAAREKVPGICLRTTLIA
GFPGETRDDVEELKDFLQRMRFDRVGIFSYSHEENTSAYDLEDNIPQAEKEARAQEIMEL
QQEISYEKNQEKIGKTFKVIVDKKEAGRYLGRTEFDSVEVDNEVVINTADKLKVGEFVNV
KITKAYDYDLEGEVVKNS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagaacactaaaggaaaataaggtcaatatcattaccctggggtgcagcaag
aatatggtggacagtgaggtcctcagtggccagttgcaagccaatgatattgcggtggta
catgagaatgccaaactcgatcacaatattgtggtggtgaatacctgtggttttatcgat
aaggccaaggaagaatccattaataccatccttgaccaggttgccctgaaacaaaaaggc
aggttggacaaggtatatgttaccggctgcctgagccagcgttaccgagatgatttggag
aaagagatccctgaagtggacgcatggtttggtaccatggaattacccctgatcctgaag
gaactgcaggccgattataaagcagagttgctgggcgaaagaatgctggccacaccgaag
cattatgcctacatgaagatatcggaaggctgcaaccgtacctgttctttttgcgctatc
cccctgatgcgtggtggacacgtgagcaggcccattgatgacctggttcgtgaagcagaa
ggactggtgcagaagggcgtgaaggaagtgatgctgattgcccaggagttgacctattat
ggacttgacctttataagaagcgccagttggctgaactgatgaacaggttggccgatgtg
aaaggcctggaatggatcaggttgcattatgcctatccttccaaattccccctcgatatc
ctggatgtgatgcgggaaaggcctaatatctgtaattacctcgacatgccgctccagcat
gcttccaataatatgctgaaggccatgaagcgccagatcaccagggaggaaatggaggac
ctggttgcagccgcgcgggagaaagtgccgggtatttgcctgagaacaacattgatcgct
ggtttccctggtgaaacaagggatgatgtagaagagctgaaagacttcctgcagcggatg
cgcttcgacagggtgggtatcttctcctattcgcatgaagagaacacttctgcctatgac
ctggaagacaatattccccaggcggagaaggaagcaagggcccaggagatcatggaactc
cagcaggagatctcttacgaaaagaaccaggagaagatcggcaagacctttaaggtgatc
gtagataagaaagaagcaggccgttaccttggccgaaccgaattcgatagtgttgaagtg
gacaacgaagtcgtgatcaacactgcagataaattgaaagtaggagagtttgtgaacgtt
aagatcactaaggcctatgactatgacctggaaggcgaagtggtcaaaaacagttaa
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