Flavihumibacter rivuli: KJS94_07675
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Entry
KJS94_07675 CDS
T08011
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
flv
Flavihumibacter rivuli
Pathway
flv00540
Lipopolysaccharide biosynthesis
flv01100
Metabolic pathways
flv01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
flv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KJS94_07675 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
flv01005
]
KJS94_07675 (rfaD)
Enzymes [BR:
flv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KJS94_07675 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
flv01005
]
Core region
KJS94_07675 (rfaD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ULQ58080
LinkDB
All DBs
Position
complement(1736418..1737398)
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AA seq
326 aa
AA seq
DB search
MNTNAVIVVTGAAGFIGSCLVGYLNLKGFNNLILVDDFSRADKKPNLEGKKFLEKIERSV
FFEWLNEHKPTIDFIFHIGAKTDTTEFNYAIHQELNVEYSQKVWNYCVVHNIPLVYASSA
ATYGGGELGYEDSHEIIPALKPLNPYGVSKNEFDKWVLHEACHPPFWAGLKFFNVYGPNE
YHKGRMASVIWHSFNQIRKDGEVKLFRSHRPEFKDGQQLRDFVYVKDVLKVCMWLMEHQP
ASGIYNLGTGKARTFEDLVRSTFKGLDLEPHIQFIDMPEDIRDKYQYFTEANMQKLRNAG
YREAFYSLEEGVDDYVRNYLSKAKYY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaatgcagtaatagttgtaaccggtgctgccgggttcatcggctcatgcctt
gtaggatacctaaacctaaaggggttcaataaccttatccttgtggatgatttttcaagg
gcggacaaaaagcccaacctggaaggcaaaaaatttttggagaagattgagcgatccgtg
ttttttgaatggctgaatgaacataaaccaacaatagatttcatctttcatattggtgcc
aaaacggatactactgagttcaattatgccattcaccaggagttgaacgtggagtattcc
caaaaggtctggaattattgtgtggtccacaatatcccattggtatacgcatcaagtgca
gcaacatatggtggaggggagttgggttatgaggatagccatgagatcatcccagccctt
aaaccattaaatccttatggcgtttccaagaatgaattcgataaatgggtattgcacgag
gcctgccatcctcccttctgggcaggattgaagtttttcaatgtgtatggacccaacgaa
taccataaaggaaggatggccagtgtcatctggcattccttcaaccagatcaggaaggat
ggggaagtgaagttattccgttcccacaggccggagttcaaggatggtcagcaattgcgt
gactttgtgtacgtgaaggatgtcttaaaggtttgtatgtggttgatggaacatcagcca
gcttccgggatctataacctgggaacagggaaagcccgcacgtttgaggacctggtaagg
tctacattcaaaggcctggacctggagcctcatatccaattcatagatatgccggaggac
atccgcgacaaataccagtattttactgaggccaatatgcaaaaattgaggaatgcgggt
tatcgagaggctttttactccctggaggaaggggtggatgattacgtcaggaattattta
agcaaggctaaatactattaa
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