Fomitiporia mediterranea: FOMMEDRAFT_106841
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Entry
FOMMEDRAFT_106841 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K22133
oxalate---CoA ligase [EC:
6.2.1.8
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00630
Glyoxylate and dicarboxylate metabolism
fme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FOMMEDRAFT_106841
Enzymes [BR:
fme01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.8 oxalate---CoA ligase
FOMMEDRAFT_106841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF6581
B-block_TFIIIC
SelB-wing_2
HTH_24
MarR_2
TFC3_eWH
Motif
Other DBs
NCBI-GeneID:
18670228
NCBI-ProteinID:
XP_007265860
JGI:
Fomme1_106841
LinkDB
All DBs
Position
Unknown
AA seq
2189 aa
AA seq
DB search
MDELLRHCLQELAFDGDLGCNAFRLRDFVQDFYSSRSSMQQNLDDSYHAFVWTLVSQHPS
VRVGIVPDDQNVEVKIPPQPRVSKKGKSTQNDAQTEGLPAASLETIPGANMRSLDELVRE
YGERLRIAVDPEMCFVAVTGSHARPAKLTPMVYASLQLIARAREAGISVLELGRTTGYDQ
KTCFYVVKQLRDLDLIVKLRRGGNSQNFCVHKYVFDRSSAWKNVREEELRAQEESAEADR
QDSNITGAGTGSLQLPHFDPIDTRHLTSLNILRQRLTKLLKHSLNYTQPYANISMKIGFR
PRSRTDRRFFIARLKELINEGAIEKFFMTSQNPDTTQNKQLYIRLAPSDRAGSVAASEKG
VKIADEEEDMIDNLVTDDGPEQAQVKCTLTLHRQILDALQESGTTGATLSDLCDQLGSFD
KRTLELLVSRMERQAPPPHLADLSIVQVLETHGRERRYRVFVLSAYSELVTREGFETPST
PYSLEDLSKAGGFLETNESDFYETRDDLRAFYKEWSGARVHRLSVFDDGGGKAQKGAKNK
LTEDGTGQSQRASKKKWTNPILPDGTRKRGRPPKNSDAASAARQGKKAKKDATVPPQSSE
AVEADSLNQAATSVSGATLGRGVKRKRGEAEEPGMMTSTSGREADSAIVPSQGSSKIPQK
RKRGRPPKQKPTTEVGVERDERDTTEVLAYPLGSTTSLPDEMHPDSIGQVSQAAGGSASP
GASTSTPVPENHSHQHPSGESESVLRPQTISDNDRLAPQFDSRAYHSTSPGVTEVDTAAR
LLMVPEPSSNDLMGQTGGIDEVTRAIASLAAQINDSISSSLPYNEGEDSSEMHLTVVQPV
KADGKSKGGESMIKSDAPDIVEGTGTTGMVTVAENSTATHAPSAPDNLENTDPSALVSTQ
KRMKGASGDRERANLSAMRRENELVQLIENLGGIVNTSTNEFQAAYLDFIETIIKAGEGA
SAPVGTRMDKRTLRYSLDKLEASGRIKVFNTSIPYITGGHRNAKIAYLPTVSEERLHAYI
AEHRNAGIVVPRRQEQIREQAKKEIEEDPNSPLGLAHRWLYLTNAHEIYQERWHRNVDRA
QQLLSHSDDVIREAMLMEKQTLSQQYGYVTGKVARARELHLGSIELLERENRSSFIISRQ
HRIVGWQFFENDITLGVYCACVSSTVFREDIRDAIATTERRNKPVKDIPDEWKQALQIGR
ARSRERISDLLDYLYSLKLVVPLRRTERDDSSKVRDPKADGNPDSNDFEPLPSDWASRIP
VIRPEYWQFCTNAPLYFFALQKDPAPFWKTVPTLSGTEAATFWEELKEASLNKKRAEEAQ
HELLASTVLHDPYSGEYRVAIALRRSSSWTSEYTFSWYQVQYLKQFINVRTGSTPLDDDE
QGASHLERISHVISAPIETVKAYYESSRASTQRDIDKMKQKQKKEKEEKKEAEMKSLLAR
KGLEAIRSREAAWDAMVERVHPGLVKGVAAGRLRRLRQSYVRGNVVQDTHQWEVQISDAI
KAAEKMRSSRNLFSKAQVAREFDKAKLGPHATITTPGVSVESLIDMQKDLVHESGRDDGS
EVTAPTSRSKSQRDKGAEYGRKRRQRFQWSAEYDELLRDAYVILRARCRTHYRLEWTALD
QVFPSLRKNSVRARLLVLKEQPGAEAYLHRLENCWHDLWIKNRGTPELPDRNPQNPTEFD
LKAHLEYLREHVDKNSIRVGVSALEEKEYTPLSASMEDFVSSWVVEERKAAHDSWDFLTN
YALGEEAREKLVLESAFVVENVDPPSNVSHSDQLSLAESALKMVIGTPDESYDSNRAAAL
LHGIGEDEISTAMENLLSRNVFSKMNRDPSRLVPGRTVKISEMNQNALSGPISKDLFLDA
SQLEESFEAAKTDQWEWPFTATDGDTAAILQLFSDHRAEFEVDTSRAQAARPAVEGNSRK
VDDDDIELGVQIKLSGMASCESEQAQLNDEPDSIEIEDTPGHGATVLGEQACCGICSDGV
VDCLKCIEDAQTQLNSFSENDKHIAESIVQNVDARSERGITIEELKGIVAAADGSLASII
HQLHTSRVPRVYVTGYDSTFVVSAKYIGSWTITLPGEDGPLTKVFPRRWLDITGDRISMV
WEAGLRAVVGLVHLRPGISQAELRWRLRAVYDRREVIDLLNHLMSSGTLKVFHGGSWQRQ
KSVCIDALTKDEETTVFWAVNEDKRWYHI
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactactacgtcactgccttcaagaattggccttcgatggtgacctaggatgc
aacgctttccgtttgcgcgactttgttcaggacttctattcgtctcgaagttctatgcag
cagaacttggatgactcttaccacgcatttgtctggacgctggtttcgcagcacccgtct
gtccgagttggtatagtcccggatgaccagaacgttgaggtcaaaatacctccacagcca
agagtttcgaagaaagggaagagtacccagaatgacgcgcaaactgagggtttgccagca
gcctcacttgagacgattccaggcgcgaatatgcgctcattggacgagcttgtcagagaa
tacggggaaaggcttaggattgctgttgacccggagatgtgctttgttgcggtgactggc
tctcatgcgaggcctgccaagctaactccaatggtatacgcttccctacaattaatagcc
cgtgcccgtgaagctggaattagtgtcctcgagcttggcaggactactggttatgaccaa
aagacctgcttctatgttgtgaagcaactccgtgatctagatctcattgtgaagctcaga
cgcggcgggaacagccagaacttttgtgtgcacaagtacgtttttgatcgtagttcagct
tggaagaatgtccgggaagaagagttgcgcgctcaagaagagtcagctgaagccgacagg
caggacagcaatataacaggagcaggaactgggtctcttcaacttccgcatttcgaccca
atcgacactagacatttgacaagtcttaacattctgcggcaacggcttactaaactcctg
aagcattcactcaactacacccaaccgtatgccaatatttccatgaaaatcggtttccgc
ccgcggtctcggacagacaggcgattctttattgctcgattgaaagagctaataaatgag
ggggcgattgagaagttctttatgacgagccagaaccccgacactacacagaacaagcag
ctgtacattcgattagctccttcagatcgagctggcagtgtagctgcttctgaaaagggt
gtcaagattgcagatgaggaggaggatatgatagacaatctggtgactgacgacggacct
gaacaggcacaagtgaaatgtactttgacacttcataggcaaatccttgacgctctccaa
gagtctggaacgactggtgccactttaagcgatttatgtgaccagcttggatcgtttgac
aagagaacattagaacttcttgtctcacgtatggaacgtcaggcgcctccaccgcatttg
gcagatttgagtatagtccaggtcctcgaaacgcatgggagggaacggcgataccgagtc
ttcgtcctaagtgcttattctgagctcgtaacccgcgaaggatttgaaaccccgtcaact
ccctactcactcgaagacttatctaaggcaggcgggttcttggaaacaaatgaaagcgat
ttttacgagacccgcgacgacctccgtgccttctataaggaatggagcggagctagggtg
cacaggctgagtgtcttcgacgatggaggaggcaaagcgcagaaaggagccaaaaataag
cttaccgaagacggtactggccagtcacaaagagcatcaaagaagaagtggacgaatcct
atccttccagatggcacgaggaaaagaggaaggccgccgaagaattcagacgctgcttct
gctgcgcgacagggaaagaaggccaagaaagacgccactgttccccctcaaagctcggaa
gccgtagaagctgactcccttaaccaggcagcgacaagtgtatctggtgcaacgttggga
agaggagttaagcgtaaaaggggagaggctgaagagcctggaatgatgactagcacctct
gggcgtgaagcggattcggcaattgtgccttctcaaggttcgtctaaaatcccgcaaaag
cgcaaaaggggtcgtccaccgaagcaaaaacctacgactgaagtaggggttgagagagat
gagagggacacaacagaggtactggcgtacccgttagggtctacgacttcgttgcccgat
gaaatgcatccagatagtatcggacaagtctctcaagcagcaggtggatcagcatctcct
ggtgccagtacctctacgccggttcctgagaatcatagccaccagcatccttctggagag
tcagaaagcgttctaagaccacaaacgatatcagataatgaccgccttgccccccagttc
gattcccgtgcataccattcgactagcccaggagttactgaggtagatactgcagctaga
ctcttgatggtaccggaaccttcatcgaacgacttaatgggtcaaacaggcggtatagat
gaagtcacaagggctattgcatcgttggcagcccagatcaatgactctatttcgtcttcc
ctgccatataacgagggcgaagacagttcggaaatgcatttgacggtcgtacagcctgtc
aaagcggacggtaaaagcaaaggcggtgaaagtatgatcaagtctgacgctcctgacata
gtggaaggaaccgggacgacaggaatggtgacggttgcagagaactcgactgcaacacat
gcgccttctgcaccggacaaccttgagaatacagatccatcggcattggtttcaactcaa
aaacgaatgaaaggggcttccggtgatcgcgaacgagctaacctgtcggcgatgcgccgc
gagaacgagcttgtccagctgatcgagaatttgggtgggatagtaaacacgtccacaaac
gaattccaagcagcatacctggacttcatagaaactatcatcaaggcaggggaaggtgcc
agtgctccagttggtacgaggatggataaacgaacgctgagatacagtctcgataaactc
gaagcgagtggtcgaattaaggtctttaataccagtattccatacataacgggcggacat
cgcaatgcgaagatagcttacttgccgacggtgtccgaggaacgtctacacgcatacatc
gctgagcatcgaaacgctgggatagttgttccgcgtagacaggagcagatccgagaacaa
gcgaagaaggaaatagaagaggatccaaacagtccgcttggccttgcgcatcgttggcta
tatttgaccaatgcacacgaaatatatcaagagcgatggcataggaatgtggaccgagct
cagcaactgcttagccactctgacgatgttatccgggaagcaatgcttatggagaagcag
actttatcacaacagtacggatatgtaactggaaaggtcgcgcgcgctcgggagctgcat
ctcggatccattgaactcttggaacgtgaaaataggtcttctttcattatatcccgtcag
catcgaatcgttggttggcaattcttcgagaacgacataaccttgggtgtgtactgcgct
tgcgtctcctcgaccgtcttccgtgaggacattagagatgctatcgcgacaaccgaaaga
cgaaacaaaccggttaaagacattcctgacgagtggaagcaagccttgcagattggcaga
gcgagatcacgcgagcgaatttccgacttgctggactatctttactcgttgaaactggtg
gttcctcttaggcgaacagaacgagacgactcttccaaagtccgagaccccaaagctgac
ggaaacccagactctaatgattttgaacctcttcctagcgactgggcatccaggatcccc
gtaatccgacctgaatattggcaattctgcaccaacgctcctttatatttctttgctctt
cagaaagatcctgcgcctttctggaagacagtcccgacactttccggaactgaagccgcg
acattctgggaggagcttaaggaagcttccttgaacaagaaacgtgcggaagaagctcaa
cacgaacttttggcgtccacggtgcttcatgatccttacagcggggagtaccgcgttgct
atcgctctcagacgctcatcatcatggacttcagaatatacattttcgtggtatcaagta
cagtatctaaagcaatttatcaacgtccgcactggtagcacaccgctcgatgatgacgaa
caaggggcaagccatctcgaaaggataagccatgttatatctgcaccgatcgaaactgta
aaagcttattatgaatcgtctcgtgcatcgacacaacgggatattgacaagatgaagcag
aagcaaaagaaagagaaagaggagaaaaaggaggccgagatgaagtcgcttctagcacga
aaaggcttagaagctatccgtagtagggaagccgcgtgggacgccatggtagaaagggtg
catcctggactagttaaaggtgttgcagcaggacgtcttcgtagactccgacaatcttat
gttcgaggcaacgttgtacaagacactcatcagtgggaggtgcaaatatctgatgcgata
aaggcagctgagaagatgaggagcagccgcaatttattctcgaaagctcaggtcgctcgt
gaatttgacaaagcaaaacttggacctcatgccactatcactaccccaggcgtgtccgtc
gaatcgctcattgatatgcagaaggacctggtccatgaaagtggaagagacgatggtagc
gaagttactgctcctacaagtagaagcaagagtcaaagggacaagggcgctgaatatggg
cgaaagcgccgccaaagattccaatggagtgcggaatacgacgaattgctccgtgacgcc
tatgtaatcctgcgtgcgcgctgtcgaactcattacaggcttgaatggactgctttggac
caggtgttcccttccctccggaagaatagtgttcgggcgcgattgttagtcttgaaggag
caacctggagcggaggcatatttacatcgactggagaattgctggcatgacctctggatc
aagaaccgaggcacgccagagcttccggacaggaatccacaaaaccccaccgagttcgat
cttaaggcacatttggaatatttgcgagagcatgtggataagaactcgatacgggttggt
gtttctgcccttgaggaaaaggagtacactcctttatccgcgagcatggaagacttcgtt
tcatcatgggttgtggaggaacgaaaagcggctcatgactcctgggattttttaacaaac
tatgccttaggcgaagaagctcgagaaaagctggtcttggaaagcgccttcgttgtggaa
aatgtcgaccctccgagcaatgtctctcactccgatcagctgagtcttgcggagtctgct
ttgaagatggttatcggaactcccgacgaatcgtatgattctaatcgagctgctgcgttg
ttacatggaataggagaagatgaaatctcaacagcgatggaaaacttgttatcgagaaac
gtgttctcaaagatgaaccgggacccaagtcgactggtgcctggacgcacggtcaagata
tcagagatgaaccagaatgctctcagtggacccatttcgaaggacctttttcttgacgcc
tcgcaactggaggaatcttttgaagcagccaagaccgaccagtgggaatggccattcacg
gccactgacggggacacggctgcaatactccagctgttttcagatcatagagcagaattc
gaagtcgatacctctcgcgcacaggctgctcgtcctgctgtagaaggcaatagtaggaaa
gtcgacgatgatgacatcgaactaggcgtgcaaatcaagttgagtgggatggcgagttgc
gaaagcgaacaagcgcagttgaacgacgaaccagactcgattgagattgaagatacgcct
ggtcacggagcgacggtgcttggtgaacaggcttgctgtggtatctgttcagacggagtc
gtggattgtttgaaatgcatcgaagatgcgcaaacgcagctaaacagcttctcggaaaac
gataaacatattgcggagtccattgtccaaaatgttgatgctcggtcagagcgtggcatc
acgattgaggagctaaaaggtatcgttgctgctgcggacggatcgctagcgagcatcatt
caccagctgcacacatcacgcgtgcctcgagtctatgtaactggttacgactcgacattt
gtcgtatccgcgaagtatatcggttcttggacgatcacgctaccaggagaagacggccct
ctgacaaaagtgttcccgaggcgatggttggacataactggagaccgcatctcgatggtt
tgggaggcgggccttcgggctgttgttgggcttgttcatttaagaccgggtatatctcag
gcggagcttcgttggagactgagggcagtgtatgaccgccgagaagttatcgacctactg
aaccatctgatgtcgagcgggacgctgaaagtttttcacggaggatcctggcaacgacag
aagagtgtgtgcattgatgcgctaacaaaggacgaagaaacgacagtattttgggcagtg
aacgaggacaaacgatggtaccatatctga
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integrated database retrieval system