Fomitiporia mediterranea: FOMMEDRAFT_18232
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Entry
FOMMEDRAFT_18232 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
fme
Fomitiporia mediterranea
Pathway
fme03008
Ribosome biogenesis in eukaryotes
fme03013
Nucleocytoplasmic transport
fme03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOMMEDRAFT_18232
03008 Ribosome biogenesis in eukaryotes
FOMMEDRAFT_18232
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FOMMEDRAFT_18232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_18232
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_18232
03016 Transfer RNA biogenesis [BR:
fme03016
]
FOMMEDRAFT_18232
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_18232
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FOMMEDRAFT_18232
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
FOMMEDRAFT_18232
Pre-60S particles
FOMMEDRAFT_18232
Transfer RNA biogenesis [BR:
fme03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
FOMMEDRAFT_18232
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
FOMMEDRAFT_18232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
18677521
NCBI-ProteinID:
XP_007264168
JGI:
Fomme1_18232
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MEALLDFSREPFDVELLDRVVMAFYSGAGSEHQMAQRVLTQFEEHPDSWSRVPDILERCS
FQQSKYIGLQILEKLVQTRWKMLPEGQRQGIRNFIVGVVVKVSSDEQTMRREKSYVNKLN
LALVQILKQEWPHNWPTFIPELVESSKTNLSLCENNMVILKLLSEEIFDFSAEQMTQAKT
KNLKNQMCGEFSEIFKLCSEILEEAQKTSLIRATLETLLRFLNWIPLGYIFETTIIDLLM
TRFLEVADFRNVTLKCLAEIAALNVGPEYDPKFVILFAMVMTSVNRMIPPNTNIAEAYAN
ANDSGQELVLNLALFLTNFLSNHLRAVETEQNRDVLLNAHLYMVKVSQVDEREIFKICLE
YWLKLVAELYEEIQSLPIGDSGLLMGLNLGNSSMLNSVNLRKNIYSDVLSNLRLVVIEKM
VKPEEVLVVENDEGEVVREFMKESDTIVLYKSMRELLVYLTHLDVLDTENILTEKLAKQV
DGSEWSWNNLNTLCWAIGSISGAMNEETEKRFLVTVIKELLGLVEMKRGKDNKAIVASNI
MYIVGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIAQKCRRHFVMQQS
GETEPFVDEILRSLHRITVDLAPLQVHTFYEAVGYMISAQPNKPQQEKLIAKLMELPNNA
WDSLMAQAAQNMDVLSSIDNIKILANVLKTNVAACQSIGSFFLPQLGRIFMDMLGLYKAV
SGIISESVAREGLIATKTPKVRQLRTVKKEILKLMETYIKKAEDLDAVYNNFIPPLLDAI
LGDYSANVPAARDAEVLNVMAAITTRLGPLLTPQIPPVLDAVFEPTLSMINQDFSEYPEH
RVGFFKLLRAININCFPALLGLPPPTFKMFMDSIIWAIKHTMRDIADMGLNLCLEVVNNF
AAAEQSVSNAFFQQFFLSITQDIFYVLTDTDHKSGFKLQSLLLARLFQLVETNQIQAPLF
DPSTVADPNISNAVFLREYCTNLLKTAFPHMQLAQVQAFVVSLGELHSDINRFKLSLRDF
LISLKEFSGDNAELFLEEKEAEAQRKAEEERSAAMRIPGMLKPSQIEDKDEDI
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccttctcgacttttcacgggaaccattcgatgtcgagctcctcgatcgcgtc
gtgatggccttttactcgggcgcaggcagcgagcatcaaatggcacaacgcgtcttaacc
caattcgaagaacatccagactcttggtcgcgtgtcccggatatcttagaacgttgctcg
ttccagcagtccaagtacatcggtctacaaattttggagaagctcgtgcaaactcgatgg
aagatgcttccagagggtcaacgacaagggattcgaaatttcattgttggagtggtcgtc
aaagtctcttccgatgagcaaacaatgagacgagagaaatcatatgtcaacaagctcaac
ttggcattggttcaaattttgaagcaagaatggccacataattggccgacttttattccc
gaacttgtcgagtcgtcaaagactaacctgtccctttgcgagaataacatggttattctc
aaacttctgtccgaggagatttttgacttttcggccgaacaaatgacccaggcaaagaca
aagaacctgaagaaccagatgtgcggcgagttctccgagatattcaaactctgctccgaa
attctcgaggaggcgcagaaaacgtcactcatcagagcaactttggagacgcttctacgt
ttcttaaactggatcccactaggttatatctttgagacaactataattgatctcctaatg
acgaggttcctcgaagttgccgattttcgaaacgtcacattgaagtgcctagcggaaatt
gctgccttaaacgtaggtccggaatacgaccccaagtttgtcattctgtttgcgatggtc
atgacatccgtcaaccgcatgatcccaccaaataccaatatcgctgaagcatacgcaaat
gcaaatgactctggacaggagttggtgttaaaccttgcgctgttccttaccaatttcctc
tcaaatcacctccgagctgtcgagacagagcagaaccgcgatgtcctcctgaacgcacac
ctgtacatggtgaaagtctctcaagtagacgaacgggagatcttcaagatctgtctggag
tattggctaaagctcgtcgctgagttgtatgaggaaatccagagtctacctattggagac
tcgggtctccttatgggacttaacttaggaaattcttccatgcttaatagcgtgaaccta
cggaagaatatttacagtgacgtgctttcgaatcttcgactggttgttattgaaaagatg
gtcaagccggaagaggtcctcgtcgtggagaatgacgaaggtgaagttgtccgcgagttc
atgaaggagagcgataccattgtcctctataagtctatgcgtgaacttctcgtgtatctg
acacatctggacgttctcgacacggaaaatatcctgacggagaagcttgcaaagcaagtc
gacggttccgaatggtcgtggaataacctcaatacactgtgctgggccatcggttctatt
tctggagctatgaatgaggagacggagaagcgattcctcgtgactgtcataaaagaactt
cttgggcttgttgaaatgaagcgtggaaaggacaacaaggcgattgttgcttccaacatc
atgtatattgtcggccaatatccacgtttcctcaaagcgcattggaagttcctgaagact
gtggtcaataagctcttcgagtttatgcacgagacgcatgaaggagtacaagatatggcc
tgtgatactttcatcaagatcgcgcagaaatgcaggcgacacttcgtcatgcagcaatct
ggggagacagagccattcgtggatgagatcctgcgctccctgcaccgcattaccgtcgat
ctcgctcctttgcaagtgcatacattctacgaggcagttggttacatgatttccgcgcag
ccgaataaaccgcagcaggaaaaattaatagcaaagctcatggaattacccaataatgct
tgggattccctgatggcgcaggcagcgcagaacatggatgtgctcagcagcatcgataac
atcaagattctcgccaatgtactcaaaacaaatgttgcagcctgccagtcgattggaagc
tttttcctaccacaattaggacgcatattcatggatatgcttggactctacaaggccgtt
agcggcattattagcgaatctgtcgctcgggaaggtctcatcgccactaagactccgaaa
gttcgccaattgcgcaccgtcaaaaaagaaatcctcaagctcatggagacctatataaaa
aaggcggaggatttagatgccgtgtacaacaactttatccccccattattagacgcaatt
ctcggggattacagtgcgaacgtacctgcagctcgtgatgctgaagttctcaatgtgatg
gccgccatcactacacgccttgggccacttcttactccacagattcctccagttctggat
gctgtcttcgagccaactctgagcatgatcaatcaggacttttccgagtatcctgaacac
cgtgtcggattcttcaagcttctacgagccatcaacattaactgcttcccagcattactt
gggttgcctccaccaacgttcaagatgtttatggatagcattatttgggctatcaagcat
accatgcgggatattgctgacatgggcttgaatctctgtcttgaagttgttaacaacttc
gctgcagcagaacaatccgtctcaaacgctttcttccagcagttcttcctgagtatcaca
caggacattttctacgtcttaaccgatacggaccacaagagcggcttcaaactacagagt
ttgctattggcacggttattccaattagtagagacgaaccaaatccaggcgccgttgttt
gacccatcaacggtggcggatcctaacatctccaatgcggtcttccttcgcgagtactgc
accaacctcctcaagacagcattcccgcacatgcaattggcccaagtacaggcattcgtc
gtaagccttggcgagctgcacagcgatatcaaccgcttcaagctctccttgcgcgacttc
ctcatctcactaaaggagttctccggagataacgctgagttgttcttagaagagaaggaa
gcagaagctcagaggaaggcggaggaagaacgtagtgcggcgatgcgcattcccggaatg
ttgaaaccttcgcagatcgaagacaaggatgaggatatctaa
DBGET
integrated database retrieval system
