Fomitiporia mediterranea: FOMMEDRAFT_77828
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Entry
FOMMEDRAFT_77828 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00260
Glycine, serine and threonine metabolism
fme00270
Cysteine and methionine metabolism
fme00450
Selenocompound metabolism
fme01100
Metabolic pathways
fme01110
Biosynthesis of secondary metabolites
fme01230
Biosynthesis of amino acids
Module
fme_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FOMMEDRAFT_77828
00270 Cysteine and methionine metabolism
FOMMEDRAFT_77828
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FOMMEDRAFT_77828
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fme04147
]
FOMMEDRAFT_77828
Enzymes [BR:
fme01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
FOMMEDRAFT_77828
Exosome [BR:
fme04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FOMMEDRAFT_77828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Motif
Other DBs
NCBI-GeneID:
18679831
NCBI-ProteinID:
XP_007264418
JGI:
Fomme1_77828
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MTVSYSDGFGTHSVHTGSAPSLETGAVIPPISLATTYEQSAVGVHKGYEYTRSGNPNRDQ
LEALLVGIEKGGQFALAFASGSSTTATVLQSLGPDAHVLSVNDVYGGTFRYMTKVSNLET
SFIDLEKEDDETIYAAIKSNTKLIWIESPTNPTLRLIAIPRIVAIARSHPSRPLVLVDST
FLSPYYQSPLLTGADLVMHSLSKYINGHSDVLMGALILPERHTELAQRLRFLQNAIGAVP
SAFDCWLAQRGAKTLYLRMRQHGQSALRIARFLESRIGNEVKDVIYPGLASHPLNNVAYE
SLSPHARAWVDSIGDRDLAGGFPYAENFLKSLRLFTLAESLGGVESLAELPSLMTHNSIP
TAERAQLGIGDDLVRLSVGVEDGDDLVRDIEQALQVAVYGDSVETKTDGRDEQVYSSASR
DDSPPLVG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgactgttagctattcagatggatttgggacacactcagtgcacacaggttccgcacct
tcactagaaacgggtgctgtcattcctcctatttctcttgcaacaacatatgagcagtct
gctgtcggggtgcataagggttacgaatatacccggtcgggaaatccaaatcgcgaccaa
ctcgaggcacttctagtaggcattgaaaagggcggacagtttgctcttgcgttcgcctct
gggtcttccacgacagcgacggttctccagagtctcggacccgacgcgcacgttctgagc
gtcaacgatgtttatggcggaaccttccgctatatgaccaaagtttcgaacttagagacg
tctttcattgatctggagaaggaagacgatgaaacgatctacgctgcaataaagtctaac
acgaaattaatttggatagagtccccaacaaaccctactctacgtttaatcgccatccct
cgcatcgtcgcaattgcacgctcgcatccttcaagacccctcgttcttgtagattcgaca
tttctctctccatactaccagtctcctcttctaaccggagcggatctcgtcatgcactca
ctatccaaatatatcaacggacattcagatgtccttatgggagcgcttattcttccagaa
agacacacagaacttgcccaacgtcttcgtttcttgcaaaatgccattggcgctgtcccc
agtgcgtttgactgttggcttgctcaacgaggagctaagacgttatacctccgtatgcgt
cagcacggtcagagtgctttgcgcatcgctcgcttcttagaaagtcgtataggcaacgaa
gtaaaggacgttatttaccctggtcttgcaagtcatcctctaaacaatgtcgcgtatgag
agtttgagtcctcacgcacgcgcgtgggttgatagtattggagatcgtgatctggctggt
ggtttcccttacgctgagaatttccttaaatcgctacgtctttttacgcttgccgagtcg
cttggtggtgtcgagtcccttgcggagttaccatctctcatgacacacaactccatccca
actgctgaacgtgctcaactcggaatcggtgatgacctcgttcgactaagcgttggtgtt
gaggatggtgacgacttggtgcgtgatatcgaacaggctttgcaggttgctgtatacggc
gattcagtagagacaaagacagacggtagagacgaacaagtttattcaagtgcaagcaga
gatgattctccgcctctcgttggttag
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