Fomitiporia mediterranea: FOMMEDRAFT_96005
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Entry
FOMMEDRAFT_96005 CDS
T03132
Name
(RefSeq) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00260
Glycine, serine and threonine metabolism
fme00630
Glyoxylate and dicarboxylate metabolism
fme00785
Lipoic acid metabolism
fme01100
Metabolic pathways
fme01110
Biosynthesis of secondary metabolites
fme01200
Carbon metabolism
Module
fme_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FOMMEDRAFT_96005
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FOMMEDRAFT_96005
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FOMMEDRAFT_96005
Enzymes [BR:
fme01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
FOMMEDRAFT_96005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
PLN_propep
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
18680849
NCBI-ProteinID:
XP_007270989
JGI:
Fomme1_96005
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MSQLGHLLRSSNASARVRTVGKGRGLAGGPSPSPSRTRAQGSLFKPLDTFTERHIGPNES
EQKMMLGALGFESMDAFVDASVPPSIRLPAGTMDDAVIHSFSESELLRRARDLAKKNKPF
KSYIGMGYHNAVVPPVILRNIIENPAWYTPYTPYQPEIAQGRLESLVNFQTMVMSLTAMH
VANASLLDEGTAAAEGMTMSYAASNMKRKTFVVHSGVLPQTISVLQTRAKGFGIKLVIGD
IFKLVEDEAVRSDLCGVLIQYPDVDGRVTDFSGLVSSVHAANGLVICATDLLALTMLKPP
GEWGADVVLGNSARFGVPMGYGGPHAAFFACTEKLKRKLPGRLIGRSRDATGAPAYRLAL
QTREQHIRREKATSNICTSQALLANMAAMYAVYHGPEGLARIATRVHGFTRVLAEQVEKL
GYKIENEAFFDTLTINVGSVSGGAYAVHQAARESFVNLREIDEARVGVSLDESISVEDLV
TLINIFARVVSASELSLVSLMEPSVSSFGLPFQLVRTSPFLPHPVFNTHHSETEMLRYIT
HLQNKDLGLVHAMIPLGSCTMKLNSTSSMIPLTWSGFSGVHPFMPVDQVEGYLQMIKELE
LDLCKITGFYACSVQPNSGASGEYAGLSVIRAFHESRGEGQRNICLIPVSAHGTNPASAI
MAGLKVVSVKVLPDGGLDLEDLRAKAEQYKDQLAAFMITYPSTYGVFEDGVQEACKIIHE
NGGQVYLDGANLNAQIGLTNPATCGGDVCHLNLHKTFSIPHGGGGPGVGPICVAEHLAPF
LPRHTFVPTGGEKGIAPVSSAPFGSASVLLISWAYIKMLGGSGLKASSKTALLNANYISA
RLSGHYSVRFVNGRGRVAHELLIDLSEFERSAGLRVTDFAKRLQDYGFHPPTCSWPINTA
MLIEPTESESLAEIDRFCEAMLEIRKEAQEVVDGIQPKDNNLLKNAPHPMSVLLLPEEKW
NKPYSRERAAYPLPWLREKKFWPSIARVDDAYGDLNLVCDCPSVEEVASS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcttgggcacctcttgaggtccagtaatgcctctgctcgtgtgaggacggtg
gggaaggggagaggcttggcaggcgggccgtcgccatcaccgtcaagaacgagagcacaa
gggtcattgttcaaaccccttgacaccttcacggaacgacacattgggccgaacgagtcc
gagcagaagatgatgctcggcgcacttgggtttgagtctatggacgcgttcgtggacgca
tctgttccgccgtctatacgacttcctgcagggaccatggatgatgcggttatacactct
tttagtgagtcggagctcttaagacgcgcgagggatcttgcaaagaagaacaaaccgttc
aagagctatattgggatgggctaccataacgcggttgttccgcccgttattttgcggaat
attattgagaacccggcgtggtatacaccttacacaccttaccagccggagatcgctcaa
ggtcgtctggagtcgcttgtcaactttcagactatggttatgtctcttacggccatgcac
gtcgcaaatgcatctcttctagatgaaggcactgctgcagccgagggaatgacaatgtcc
tatgctgcctcgaatatgaagaggaaaacttttgtggtccattccggcgttctccctcaa
accatctcggtccttcagacacgtgcaaaaggcttcggtatcaagcttgttattggtgat
atctttaaactcgtcgaagatgaagctgtccggtcagatctttgtggtgttttgattcaa
tatccagatgttgacgggcgagttacggacttttcggggctcgtgtcttctgtgcatgct
gcaaacggactcgttatctgcgcgactgatcttctggctctgactatgctaaaacctcca
ggtgaatggggcgcggatgtcgtcctgggtaattccgcgcgtttcggtgttccgatgggt
tatggcggcccacacgctgcgttcttcgcatgtaccgagaagctgaaacgcaaactacct
ggacgtctcattgggcggagtcgcgatgcaacgggtgcacccgcgtaccgtcttgcttta
cagacgcgtgagcaacatattcgacgtgagaaagcgacgagtaatatttgcacgagtcaa
gctctactggcgaacatggcagccatgtatgcggtgtaccatggaccagagggactggct
cgaattgcaacacgcgttcatggatttacccgtgtactggcggagcaagtggaaaagctc
ggatataaaattgagaacgaggctttcttcgatacattgacaattaatgtgggttctgtc
tccggtggcgcttatgcagtgcaccaggctgctcgtgaatcgtttgtcaacctgcgcgaa
attgacgaagcccgtgtaggggtttcgctggatgaaagcatttccgttgaggaccttgtt
acactcatcaacatctttgcacgggttgtatctgcgtctgaactatcactcgtttctctc
atggagccatcagtatcatcgttcggacttcccttccaacttgtccgcacgtccccgttc
cttcctcaccctgtgttcaacacgcatcattccgagacggagatgcttcgctatatcaca
catctgcaaaacaaggaccttggacttgtccatgccatgattccccttggcagttgcaca
atgaagctcaacagcacaagtagcatgattcctctgacatggtctggatttagcggtgta
catccgtttatgcctgttgatcaagtggaagggtacttgcagatgatcaaggagcttgaa
ttggacttgtgcaagatcactggcttctatgcttgctctgtgcagccgaactcgggtgca
tcgggtgaatatgctggcttatctgtcattcgtgcgttccatgagtcgcgtggagaagga
cagcgcaacatctgtcttatccccgtcagtgcgcatggaacgaatccagcttcggcgatt
atggcaggccttaaggtcgtgtctgtgaaggtgctcccggacggtggacttgatctcgaa
gatcttcgggcaaaggctgaacagtacaaggatcaacttgctgctttcatgatcacctac
ccttcgacgtacggcgtatttgaggatggcgtccaagaagcatgcaagatcattcatgag
aatggaggacaggtctacctcgatggcgcgaacttgaatgcacagattggcctcacgaac
cctgcaacttgcggtggtgatgtctgtcacttgaaccttcacaagacgttttctattcca
catggtggcggaggacctggtgttggccctatctgtgttgcagagcatcttgcacctttc
ttacctaggcatacatttgttccaactggtggtgagaaaggtatcgcccctgtatcatct
gcaccgttcggaagcgcttccgtactgctcatctcatgggcatacatcaagatgcttggt
ggctcgggcttgaaggcctcatcaaagacggcactgctaaatgcgaactacatctccgcc
cgcctttcagggcactacagcgtgcgattcgtgaatggacgtggacgcgttgctcacgag
ctcttgattgaccttagcgagttcgagcgtagcgcagggctacgtgttacagattttgca
aagcgtttgcaggactatgggttccatccgccgacatgctcatggcctatcaacactgcg
atgcttattgaaccgacagagagtgagagtcttgcggaaatcgacagattctgcgaggcg
atgcttgagattcggaaggaggcacaggaagttgtcgatggtatccagccgaaagataat
aaccttttgaagaacgcgccgcatccgatgagtgtcttgctgttgcctgaggagaagtgg
aataagccgtattcacgtgaacgtgctgcataccccttgccttggttgcgcgagaagaag
ttctggcctagtattgccagagttgatgatgcttatggcgatctcaacctcgtctgtgac
tgcccatccgttgaggaagttgcttcatcttaa
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