Fusobacterium necrophorum subsp. funduliforme: BSQ88_03360
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Entry
BSQ88_03360 CDS
T06168
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Pathway
fnf00540
Lipopolysaccharide biosynthesis
fnf01100
Metabolic pathways
fnf01250
Biosynthesis of nucleotide sugars
Module
fnf_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BSQ88_03360 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fnf01005
]
BSQ88_03360 (rfaD)
Enzymes [BR:
fnf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BSQ88_03360 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
fnf01005
]
Core region
BSQ88_03360 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AYV92771
UniProt:
A0A161PRW4
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Position
complement(679681..680679)
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AA seq
332 aa
AA seq
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MIVVTGAAGMIGSAVVWKLNEMGIHDILLVDKLRNEDKWLNIRKRDYRDWMDRDFFLDWL
FQDAEANEITAIVHMGACSATTETDGDYLMENNYGYTKALWDYCSQRNIRFIYASSAATY
GAGEKGYNDEVDPEELKSLQPLNKYGYSKKRFDDWVFKQKTQPRVWAGLKFFNVYGPQEY
HKGRMASMVFHSFRQYKETGKVKLFQSHKEGYEDGGQLRDFVYLKDVVDIIYYMLTQDFS
SGIYNIGTGEARSFLDLAMATIRAASGKEDIQVSDVIEFIPMPEDLRGKYQYFTQATMEK
LAKTSYHLHMHSLEEGIKDYVQNYLSQEDAYL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgtaacgggtgcagcgggaatgattggaagtgctgtcgtatggaaattaaat
gaaatggggattcatgatattcttttagtcgataaattacgaaatgaagataaatggcta
aatattcgaaaaagagattatcgtgattggatggatcgggatttctttttggattggctt
tttcaagatgcggaagccaatgaaattactgccattgtacatatgggagcttgctctgct
accaccgaaaccgatggagactatttaatggaaaataactatggatatactaaggctctt
tgggattattgttctcaaagaaatattcgatttatctatgcttcctccgcagcaacctat
ggagcgggagaaaaaggatataacgatgaggtcgatcctgaagaattaaaatctttacaa
cctttaaataaatacggatattcgaaaaagcgttttgatgactgggtatttaaacaaaaa
acacaacctagggtatgggcaggtttaaaatttttcaatgtctacggtccccaagaatat
cataaagggcgtatggcgtctatggtattccatagcttccgccaatacaaagaaaccgga
aaggtaaaattattccaatcccataaagaaggatatgaagacggaggacaattacgtgac
tttgtttatctaaaagatgttgtcgatatcatctactatatgctcactcaagatttttct
tccggaatctacaatattggaaccggagaagccagaagctttttggatttagctatggca
accataagggccgcttccgggaaagaggatattcaagtttccgatgtgattgagttcatt
cccatgccggaagatttaagaggaaagtatcaatatttcacgcaagccacgatggaaaaa
ttagccaagacaagctaccacttacatatgcacagcttagaagaagggatcaaagattat
gtccaaaattatctaagtcaagaagatgcatatttgtag
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