Frankliniella occidentalis (western flower thrips): 113203213
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Entry
113203213 CDS
T07591
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113203213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113203213
Enzymes [BR:
foc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113203213
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
113203213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
113203213
NCBI-ProteinID:
XP_026273574
UniProt:
A0A6J1RX79
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MVKEQYRETDVARKISHVSFGVDSQQRMQQQAHLHVVVKDLYDDQGGAQRRPHAYGVLDR
HMGTNQKDATCATCGKGLSDCIGHFGYINLKLPVFHVGYFRSVITVLQSICKTCSRVLLG
EKEKVQFRSRILNPDLPYLSKKALRKQILDKTKKVSVCPHCRALNGVVKKCGLLKIMHDK
YRNKKKSDPVVTDKLAEYAEAVEGNKEMESILPNALIHILNPLEVLNLLEQIPEEDIPFL
VMNPQCGRPQDLILTRIPVPPLSIRPSVVSDLKSGTNEDDLTMKLSEIVFMNDVIETREK
KQGATVQQIHDAWEFLQFLCALYINSETSGIPLNLQPKKSSRGLVQRLKGKQGRFRGNLS
GKRVDFSSRTVISPDPNLRIEQVGVPVLVAKILTFPERVNSTNLELMKKLVTNGPNVHPG
ANFVEQSGSTFKKFLRYGNRAKIAQELRPGDIVERHLLDGDVVLFNRQPSLHKLSIMAHR
AKVLEHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGNKSNLVTPRNGEL
LIAATQDFITGGYLLTQKDEFLDRGQATQLAACLLAGDDGNMNIELPRPAILKPAILWTG
KQIFSLLLRPNKLCPIKANLRTKGRAYTSNEELCINDSFVNIRNSELLAGSMDKSTLGSG
AKNNIFYVLLRDFGEDIAALAMWRLSRMASAYLMNRGFSIGIGDVTPGQGLLRAKMQLLN
AGYTKCQQYINQMSEGRLQCQPGCSEEETLEAVILKELSVIRDHAGKACLKELPRSNSPL
VMALSGSKGSFINISQMIACVGQQAISGHRVPNGFEDRALPHFHRHSKTPAAKGFVENSF
YSGLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCLQYDMTVRNSTGDIV
QFCFGGDGLDPTYMEGKDCPVDFSRVLDHVCSKCPHRDEDAMDAPSILQASQEILKSEDF
DQCSKEFKDQLREFSESVARRIARLRLKYGISDEGNANFPPVLLEPERVTISQLVEFFHT
CREKYMKAKIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAS
KNISTPIITAHLEVDDDPEFARRVKGRIEKTTLGEVSAFIEECYLPDECFILIKLDIERI
RLLKLEVNAESICYSIMTSRFKSKPKKVSAESPTLITVHPNASKTTLNGAMQALHEALPK
VVIMGLPTVARAVIHNDDSGGKTLYKLFVEGDNLREVMATPGVKGIQTTSNNTYEVFTTL
GIEAARSTIMSEIKLVMENHGMSIDHRHPMLVADLMTSRGEVLGITRHGLAKMKESVLNL
ASFEKTADHLFDAAYYGQKDAITGVSEAIIMGIPMSIGTGLFKMLHKAQESTSVEQRALV
FDDPSLHPAVNTSSSDWFEESKGTV
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggaacagtatcgcgagaccgacgttgctcggaaaatctcccatgtatctttt
ggtgtcgacagtcaacagcggatgcagcaacaagctcatctgcatgttgttgtcaaagat
ctgtatgatgaccagggaggagcgcaacgaagaccacatgcatatggtgttcttgatcga
catatgggtaccaaccaaaaagatgcaacatgtgccacatgtggtaaaggtctcagtgat
tgcattggtcattttggatacatcaatctgaagttacctgtgtttcatgttggatatttt
agatctgtcatcacagtcctgcaatccatttgcaagacgtgttctagggtgttgcttggt
gaaaaagagaaggtgcaatttcgatcccggattctaaaccctgacttaccctatctctca
aagaaagcactccgcaaacaaatacttgacaaaaccaaaaaagtatctgtctgtcctcat
tgccgtgctcttaatggggttgttaaaaaatgtggtttgttaaaaatcatgcacgacaaa
tatcggaacaaaaaaaagtctgatcctgttgtcactgataaacttgctgagtatgctgag
gctgttgagggaaataaggaaatggaatctattcttccaaatgctctaattcacatattg
aaccctcttgaagtgcttaatctcttagaacaaattccagaagaagatattccattcctt
gttatgaatccccaatgtggaagaccacaagatttgattttgacccgcatacctgttcct
ccattgagcattagaccatctgttgtctcagacctaaaatcgggaacgaatgaagacgat
cttaccatgaagttatcagaaatagtgtttatgaacgatgtaatagaaaccagagaaaag
aagcagggtgctactgtgcaacagattcatgatgcatgggaattcctacaatttttatgt
gccttgtatatcaacagtgagacatctggcatccctttaaacttacagccaaaaaagtca
agcagaggtctagtgcaacgtctcaagggaaaacaaggacgttttagaggaaacttgtca
ggaaagcgagtggacttttctagcagaactgtgatatccccagatccgaatttacgaatc
gaacaagtcggagtaccggttcttgtggcaaaaatattaacttttccagaaagagttaat
tcaaccaacttagaactaatgaaaaaattggtgaccaatgggcctaatgtacatccaggt
gctaacttcgttgagcaaagtggatctaccttcaaaaaatttttaagatatggcaatcga
gccaagatagcccaagaactaaggccaggtgatatagtagaaagacatttgttggatggc
gatgttgtactttttaataggcagcctagtttacacaagcttagtataatggctcataga
gctaaagttttggagcatcgcacttttagatttaatgaatgtgtttgtaccccatacaac
gctgactttgatggagacgagatgaatctacatctcccccaaactgaggaagccaaagct
gaagcactcattctgatgggcaacaaatctaatttggtgacccctaggaatggagaacta
ttgattgctgcaactcaagactttattacaggcggttatcttctgactcaaaaggatgag
ttcttagatcgagggcaggccactcaactagctgcatgtcttctagctggggatgatgga
aatatgaatattgagttgcctagaccggcaattttaaaaccagcaattctttggactggc
aaacaaatattcagtcttctcctgaggccgaacaagttgtgtccaatcaaagcgaacctt
cgtactaaggggagagcatacacaagcaatgaagagttgtgtatcaatgactcttttgta
aatattcgtaactctgaacttctggctggatctatggataagtcaactttaggatcagga
gccaaaaacaacatattttatgttctactccgagattttggagaagatattgctgcactg
gcaatgtggcgtctttcacgtatggcaagtgcttatttaatgaacagaggtttttctatt
ggtattggggatgtgacaccaggacaaggactattgagagctaagatgcaacttctgaat
gcagggtacactaaatgccagcaatatatcaatcaaatgtcagaaggacgtttgcaatgc
cagcctggttgttcagaagaagaaactttagaggctgttattcttaaggagctgtctgta
attcgagatcatgctggtaaagcttgtctcaaggaactgcctcgaagcaacagccctctg
gtcatggcactgagtggttcaaagggctctttcattaatatctcacagatgatagcttgt
gtaggccaacaggctatcagtggacacagagttcctaatggctttgaagaccgtgctctt
cctcatttccatagacattctaaaacacctgctgcaaaaggatttgttgaaaatagtttc
tactcaggactgaccccgacagaatttttcttccacacaatgggtggtagggaaggtctt
gtggatacagcagttaaaacagcagaaactggatacatgcagagacgtctagtcaaatcc
cttgaagatttgtgtcttcagtatgatatgacagttcgcaattctactggtgacatagtc
caattttgttttggtggagatggtctggatccaacttatatggagggaaaagattgtcct
gttgacttctctagagttttggatcatgtttgctctaaatgtcctcacagagatgaagat
gctatggatgctccaagtattttgcaagcaagtcaagaaatcctgaagtcagaggatttt
gatcaatgcagtaaagaattcaaagaccagctgagggagttttcggaaagtgtggcaaga
agaattgcaaggcttagacttaagtatggtatatctgatgaaggtaatgctaacttccct
ccagtcttgttggaaccagagcgcgtgacaataagtcaattggtagaattttttcacaca
tgtcgtgaaaagtatatgaaagcaaaaatagaaccaggtactgctgtgggtgcattagct
gctcagagtattggtgagcctggaacccaaatgacattgaaaacattccattttgctgga
gtagcttctatgaatatcacccagggtgtccccagaataaaggagattataaatgcaagt
aaaaatataagcactcctataatcactgctcacttggaagtagatgatgatccagaattt
gctcggagagttaaaggaaggattgaaaaaactactttgggagaagtgtcagcgtttatt
gaagagtgttatttacctgatgaatgtttcattctcataaaacttgatattgaaagaata
cgacttttgaaattggaagtgaatgctgaatctatctgttatagcattatgacatcaagg
ttcaaatccaagcccaaaaaagtttctgctgagtcacctaccttaataacagtgcatccg
aatgccagtaaaacaacattaaatggtgcaatgcaagccctccatgaagcacttccaaaa
gttgtcataatggggttgcctactgttgcccgtgctgttattcacaatgacgattctggc
ggaaaaacactttacaaacttttcgttgaaggagataatttacgtgaagtaatggctact
ccaggtgtaaaaggcatccaaaccacgtccaataatacctatgaggtttttactactctt
ggtattgaggctgcaagatccactattatgtctgaaatcaaactggttatggaaaaccat
ggtatgagtatagatcaccgacatccaatgcttgttgctgatctgatgaccagtagagga
gaggtgcttggtattactcgacatggtttggctaaaatgaaagaatctgttcttaatcta
gcttcttttgagaagacagctgatcatttatttgatgctgcatattatggacagaaggat
gcgattacaggagtaagtgaagctataatcatgggaattccaatgtccattggaacagga
ctcttcaaaatgcttcacaaagctcaggaatcaacctctgtggagcaaagagctctggta
tttgatgatccctcactgcatcctgctgtcaatacctcatcaagtgattggtttgaagag
agcaaaggaacagtatga
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