Frankliniella occidentalis (western flower thrips): 113207724
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Entry
113207724 CDS
T07591
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113207724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foc03400
]
113207724
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113207724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
zf_CopZ
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
113207724
NCBI-ProteinID:
XP_026280181
UniProt:
A0A6J1SNQ4
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MSAQKNTLFNYFGKSPAGKASPSGSPAPGTPKTSKVTDSPSATPKRALSSAARSGAQDSP
KSSKSEFQLKDIVWAKLDSYPWWPSLVCNDPDSDKFLRGASIHVQFFDDPPTRSWVKLKM
VEKYGGSSGKPLPTSQVKEWQKACEEADKALKMSDTEKEELIVNFSEMDEDKENASDHDT
SMNTTDEGSKKGGAFQLDSEDSEDEFKPKDEDMESASDDDGSEEDNPSEEETSGADEPET
PSPDKSKKRKRPAKASHTGNAAKKPNGVMGPPRTPTVKTAVKNQLASFSASKNSPARPAN
IESADGSNDSTGEGANGSWTHLKLDFLKPEKIRDANKHRPDHPDYNPRTLFVPEDFKRNQ
TPAMRQWWEMKSQHYDCVLFFKVGKFYELYHMDAVIGCNEVELTYMKGDFAHSGFPEKAY
GRFSASLIDKGYKVARVEQTETPDMMNERCKTILKPTKFDKVVKREICAVTSRGTRVFGV
QDGEPMDMGSTNYLLAICEEEVDSKVSYGVCFIDTSIGTFHMGQFTDDRHCSRLLMLLAH
HPPVHVLYERGGLSDRTLQLLNSQLTAVVKEVLSPESEFWSASKTLSKLAEGDYFSEEGK
PHEWPESLKVFISDVDSLGLSPAEEYQLAVKSLGAITWYLQTCHLEQQLLSMRRFEQYIP
IDAVDGAKLPGLSGRHMILDGVTLKNLDVLQNKAGTHEGTLLNSLDQCCTPFGKRLLHQW
ICAPLTTVSNIVSRQEAISELLQNSHVMEETRGMLAELPDLERLLSKIHTQGNSVRSKTH
PDSRAIFYEDQIYSKKKIMDFIATLNGFKKAYKIGSLFESAKDNMNSDLLKQVTCTKAGY
PNGTFPDLEEPLEFFEKAFDHEEAQKEGRIIPSTGVDPDYDSAVSEYDQIKKELDAYLKS
QCSHFSCKVVYFGTDKNRFQLEVPEHAAKKAGNTYELKSQKKGFKRFWTPETKDLLARMT
QAEEAKTSVLKDLNRRIFAQFSSKFEVWDGAVQSLAVLDVLMSLAEYARKEEGEICIPVI
TEPSKCDKPFIRLKEGRHPCLSGETLDSYVPNDTVIGTDGIASVILVTGPNMGGKSTLMR
QAGLLLIMAHMGCHIPAQECEFSPIDRIFTRLGANDDIMAGESTFFVELSETSAILHHST
KHSLILVDELGRGTSTYDGTAIAAAVVRELASLNARTLFSTHYHTLVDEFKNSEQVTLGH
MACMVEDDNDEGGEETVTFLYKFSGGACPKSYGFNAARLAGVPSHITRAGRSKAAQLERE
SERRRVFRALCGFAGKPIPNAELQSLLAAV
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcaaaagaacacgctgtttaattattttggaaaatcgccggcggggaaagcg
tctccgagtggaagtcccgctccaggaactcctaagacatcgaaagtgacagattcgccg
tccgcgacgcccaagcgagccctctctagtgcggcgcggtcaggcgctcaagacagtcca
aaaagctccaaatcggagttccaactgaaagatattgtatgggctaaacttgattcctac
ccctggtggcccagtttggtctgcaatgatcctgattctgacaagtttctccgtggagcc
agtatccacgttcaattttttgatgaccctcctacaagatcatgggtgaagttaaagatg
gtagaaaagtatggtggaagctcaggaaaacctttgccaacttcccaggtcaaagaatgg
cagaaagcttgtgaggaagcagacaaggcattaaaaatgagtgatactgaaaaggaagag
ttgattgtaaacttttctgaaatggatgaggataaagaaaacgcaagcgatcatgatacc
tcaatgaatacaactgatgaaggcagcaagaaaggaggtgccttccagcttgatagtgag
gattcagaagatgaatttaagccaaaggatgaagatatggaaagtgcatcagatgatgat
ggttctgaggaggacaatccatctgaagaggaaacatctggagctgacgaacctgaaaca
ccttcacctgacaagtcaaagaagcggaaaagaccagcaaaagcctctcatacagggaat
gctgctaaaaagccgaatggtgtcatgggtcctccccgaacaccaactgttaaaactgct
gtcaaaaatcagttggcctcatttagtgcttctaagaatagtcctgctagacctgctaac
attgaaagtgctgacggtagtaatgactctactggcgagggagcaaatggctcatggaca
catctcaagcttgactttttgaaaccagaaaagattcgcgatgctaataaacatcgaccg
gatcacccagattacaatcccagaactctatttgtaccagaagatttcaaaaggaaccag
accccagctatgcgtcagtggtgggaaatgaaatcacagcactatgactgtgtcttattc
tttaaagtgggcaaattctatgaattgtaccatatggatgctgtgattgggtgcaatgaa
gtagagttgacttacatgaaaggggattttgctcattctggattcccagagaaagcttat
ggtcgcttttcggcatctctcattgataaaggatataaggtagctagagtggaacaaact
gagacccctgatatgatgaatgaacgatgtaaaactattcttaaacctacgaagtttgac
aaagttgtcaagcgtgagatttgtgctgtgacttctcgtggaaccagagtttttggtgtt
caagatggtgaacctatggatatgggttccacaaattatctcctggctatttgtgaagag
gaagttgattctaaggtctcctatggagtttgtttcattgacacatctattggcacattt
cacatgggacaattcacagatgatcgccactgctcccgccttttaatgcttcttgctcat
catcctcctgttcatgttttgtatgagcgtggaggcctttctgatagaactcttcaattg
ctgaacagccagttaactgctgtagtgaaagaagttctttctcctgaatctgagttctgg
tctgcttccaaaacactctcaaaactagctgagggtgactacttttctgaagaaggcaag
ccccatgaatggcctgaatcactcaaagtgttcatcagtgatgtggactcgcttggtctt
tcccctgctgaagaataccaacttgctgttaaatctttgggtgcaattacttggtacctg
caaacttgtcatctcgaacagcaactccttagcatgcgtcgttttgaacaatacattcca
attgatgctgtggatggagcaaaacttcctggactctctgggcgtcacatgatcttagat
ggagttacattaaagaacctggatgtgcttcaaaacaaagctggcacccatgagggcaca
cttctgaactccttggatcaatgttgtacaccatttggaaaaagactactgcaccaatgg
atttgtgcaccgctcacaacagtctccaacattgtttcgaggcaagaggccatatcagaa
cttctgcaaaacagccatgtgatggaggagactagaggaatgctggcagaattaccagat
ctggaaaggctacttagcaagatccacactcaaggtaacagtgtgaggagtaaaactcat
cctgatagtcgtgcaatattttatgaagatcaaatttactccaaaaagaaaataatggac
tttattgctaccctgaatggattcaagaaagcttataaaataggaagtctctttgaaagt
gccaaggacaatatgaattcagatctgctaaaacaggttacttgcaccaaagctggatat
ccaaatggcacctttccagacctagaggaacctttggaattttttgagaaagcatttgat
catgaggaagctcagaaagagggcagaattattcctagcactggggttgatcctgactat
gacagtgcagtttcagagtatgatcagatcaaaaaggaacttgatgcatatcttaaaagt
caatgcagtcacttttcatgcaaggtagtttatttcgggacagataagaaccgcttccag
cttgaagtaccagaacatgctgctaagaaagcaggtaatacatatgagttaaagtctcaa
aagaaaggtttcaaacgattttggaccccagaaactaaagatcttctagctcgaatgacc
caggctgaggaggcaaaaacatctgttttaaaggatttaaatcggagaatttttgctcaa
ttcagttctaaatttgaagtgtgggatggtgcagttcagagcttggcagtgcttgatgtg
ctgatgtccctggctgagtatgccagaaaggaagagggagaaatttgtattccggtcatc
actgaaccatccaaatgtgataagcctttcattcgtttaaaggagggacggcatccctgc
ctgtctggtgaaacacttgatagctatgtccccaatgatacagtgattggcacagatggc
attgcaagtgttattttagttactggtcctaatatgggaggcaagtcaacccttatgcgc
caagctggcctcctcctcatcatggcccatatgggttgccatattcctgctcaagaatgt
gaattttctcccattgaccgtatctttactcgtctgggtgccaacgatgatataatggct
ggtgaaagtacattctttgtggagcttagtgagacatctgcaattcttcaccattctaca
aagcattcactaatccttgttgatgaacttggccggggaacctccacatatgacgggaca
gcaatagccgctgctgtagttagagaattggcgtctctcaatgcaagaactctgttctct
actcactatcacacattggtcgatgagtttaaaaattccgaacaagtcactcttggacat
atggcttgtatggttgaagatgataatgacgaagggggagaggagacagttaccttcctc
tacaagttttctggaggtgcctgccccaaatcgtatggcttcaatgcagctcgtttagct
ggagtaccttctcatataactcgagctgggcgttcaaaggcagcacaattagaaagagaa
tcagaaagacgacgagttttcagagcactttgtgggtttgctggcaaaccaattcctaat
gctgaactgcagtcattacttgcagctgtttaa
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integrated database retrieval system
