Formosa sediminum: FNB79_08885
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Entry
FNB79_08885 CDS
T06103
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fop
Formosa sediminum
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fop03009
]
FNB79_08885 (rimO)
Enzymes [BR:
fop01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FNB79_08885 (rimO)
Ribosome biogenesis [BR:
fop03009
]
Prokaryotic type
ribosomal protein modification factors
FNB79_08885 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QDO94090
UniProt:
A0A516GRU7
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All DBs
Position
2028076..2029380
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AA seq
434 aa
AA seq
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MRTKSLKKNKINVVTLGCSKNVYDSEVLMGQLKASGKDVVHEEEGNIVVINTCGFINNAK
EESVNTILEFMQKKEDGEVDKVFVTGCLSERYKPDLQKEIPNVDEYFGTTELPGLLKALG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSTPIEELVVEAEKLA
ANGVKELILIAQDLTYYGLDLYKKRNLAELLEALVKVEGIEWIRLHYAFPTGFPMDVLEV
MNREPKVCNYLDIPLQHISDAILKSMRRGTTQEKTTKLLKEFRKAVPEMTIRTTLIVGYP
GETEEDYQTLKQWVKDMRFERLGCFTYSHEENTHAYNLEDDVPEDVKQERANEIMEIQSQ
ISWELNQAKIGQEFKVVIDRKEGNYFVGRTEYDSPDVDNEVLIDASETYLKTGEFTHVII
TEAADFDLYAKVVK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgaaatcacttaaaaagaataaaatcaacgtcgtaacccttggttgtagtaag
aatgtgtacgatagcgaagtgctaatgggacaacttaaagcaagtggtaaagatgttgtt
cacgaagaggaaggtaatattgttgtaattaatacctgcggtttcattaataatgcgaaa
gaagaaagtgtgaatactattcttgagttcatgcaaaagaaagaagatggagaggtcgat
aaagtatttgtaacagggtgtttgtcggagcgttataagccggatttgcaaaaagaaatt
ccaaatgtagatgagtatttcgggactacagaattaccaggcttgttaaaagcattaggt
gcagattataaacatgagttaataggagaacgtttaacaacaacacccaaaaactatgcg
tatttaaaaatcgctgaaggttgcgatcgtccgtgctcgttttgtgcaattcctttaatg
cgtggtaaacataaatccacacctattgaagaacttgtggtggaagctgaaaagttagca
gcaaatggcgtaaaagaattaattttaatagcacaagatttaacttattatggattagat
ctttataaaaaacgtaatctagcggaactgttagaagctttagtgaaagttgaaggtatt
gaatggattcgtttacattatgcatttccaactggattcccaatggatgttttagaggtt
atgaatcgcgaacctaaagtgtgtaattatttagatattccattgcagcatatttctgat
gctatacttaaaagcatgcgccgcggaaccacacaagaaaaaacaacaaaattattaaag
gaatttagaaaagcagttcctgaaatgaccattcgtacaacacttattgtagggtatcct
ggcgaaacagaagaagattatcaaaccttaaaacaatgggtaaaagatatgcgttttgag
cgtttaggatgttttacatattcgcacgaagaaaatactcatgcctataatttagaagat
gatgttccagaagatgtaaagcaagaacgcgctaatgaaattatggaaattcaatctcaa
atttcttgggaattaaatcaagctaaaattggtcaagagtttaaagtcgttatcgataga
aaagaaggaaattattttgtagggcgtaccgagtacgattcgccagacgtagataatgaa
gtccttatagatgcttctgaaacctatttaaaaacaggcgaatttacacatgttattatt
actgaagctgcagattttgatttgtatgctaaggtggtaaagtaa
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