Fusarium oxysporum: FOXG_11265
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Entry
FOXG_11265 CDS
T04882
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
fox
Fusarium oxysporum
Pathway
fox03020
RNA polymerase
fox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOXG_11265
09124 Replication and repair
03420 Nucleotide excision repair
FOXG_11265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_11265
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_11265
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
FOXG_11265
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
FOXG_11265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Calycin_like
Motif
Other DBs
NCBI-GeneID:
28952678
NCBI-ProteinID:
XP_018249360
UniProt:
A0A0J9VKH4
LinkDB
All DBs
Position
1:complement(1341703..1344056)
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AA seq
408 aa
AA seq
DB search
MHIYSQGLSSHCCENSPSLFHLRLHLLILAVSNPFYFTHVNLPITVFATRDTAPTLLVDS
FRRATLANMDGMDYDPMVMDGEPEQPQVKISAADHTHVDFELSKTNLAFANAVRRIIQAE
VPTIAIDLVEIETNSSVLADEFIAHRLGLIPLDSKGVDELNYSRDCDCEQYCEQCSVTLT
LHAKCTSDEIMKVYARDLVVDGRHMNGVGSPVITDPEGYGCLIAKLRKGQELKISCIAKK
GIAKEHAKWMPTSAVGFEYDPHNKLHHIDWWFENDTDPAVEWPKSKYAEWEEPPQEGEPF
DYDAVPNRFYFEVETSGSMEPDQIVQNGIRVLQQKIGGLLKGLDPRKYGGDEAEFDGPRS
PDMNMDGGTTPWQDGGYTTPYGGGGGQTAYGGGMTAYGTTPYGGSSWQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcacatctacagtcagggcctcagttcgcattgttgcgaaaactcgccctctttattc
catttacgccttcaccttttgatcctcgcagtttccaatcctttttactttacgcacgtc
aaccttccaataacggtttttgctactcgcgacactgcgcctactctgctagttgattct
ttcaggcgcgcgacgcttgcaaatatggatggaatggattatgacccgatggtgatggat
ggggagccagagcagccccaagtgaagatctctgcggccgatcacacccacgtcgatttc
gagctatcaaagacgaaccttgctttcgccaatgccgtgcggcgaatcatccaggcagaa
gtgcccacgatcgccattgacctggtcgagatcgagaccaacagctccgtgctggccgac
gagttcatcgcccaccgcctgggtctgattcctctcgactcaaaaggagttgacgagctc
aactactcacgagactgcgactgcgagcagtactgcgaacaatgcagtgtcactctgaca
ctgcacgcgaagtgcacgtccgacgaaattatgaaggtgtatgcgcgggatctggtggtg
gatggtcgtcatatgaatggagtgggaagcccagtgatcacagatccggagggttacggc
tgcttgatcgcgaagctgcgcaagggccaagaattgaagattagctgcattgccaagaag
ggaatcgcaaaggagcacgccaagtggatgcctacatctgcggtcggttttgagtatgat
cctcataacaaactgcaccatattgactggtggtttgaaaacgacacagaccctgctgtt
gaatggcccaagagcaaatatgctgagtgggaagagcctcctcaagaaggcgaacccttt
gattacgatgcagttccaaacaggttctacttcgaggttgaaacatcagggagcatggaa
cctgaccaaatcgtgcaaaacggtattagagttttgcaacaaaagatcggtggtcttctc
aagggcctagaccctaggaagtatggcggtgacgaagctgagttcgatggtcctcgaagt
cctgatatgaacatggacggcggtaccacaccttggcaggatggagggtacactacgcct
tatggtggtggtggcggccagacggcgtacggaggtggcatgacagcctacggaacaaca
ccgtacggaggatcctcttggcagtaa
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