Fusarium oxysporum: FOXG_13951
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Entry
FOXG_13951 CDS
T04882
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
fox
Fusarium oxysporum
Pathway
fox03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOXG_13951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_13951
Enzymes [BR:
fox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOXG_13951
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
FOXG_13951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
28955171
NCBI-ProteinID:
XP_018253426
UniProt:
A0A0J9VXA2
LinkDB
All DBs
Position
10:1133428..1138516
Genome browser
AA seq
1651 aa
AA seq
DB search
MNIAQPVASGVESVEFTFLSPKEIRAISVKRIENPETFDNLLNPVPGGLYDPALGSWGDA
PLHVFMDQAYRLLKAACVYCKGFRLPQKELHKYVCQLKLLQHGLIQEAHVVGAIGDNELA
IELGDFSELESEAEEEGGTNSIDNVTRARDKYVDKCLSGIKIKRGDTKRGKHEGSSEMRR
EIIKEFLAEITKRRVCASCGGISPSYRKDRFVKVFERSLSDKDKAKMAQKNFKQADAMAR
VHQAATKQKPDGYSSDEGVADVASPTRETSRVNGDVTDQDTEMIDADTASTSSSPQRYIS
AMEVRARLNELFTKEQELVSLLYNAKPPTRSSTNVTPDMFFLTTILVPPNRYRPEARTGE
SEISEAQQNSLYKNILRGCGTIARLHRELQEEKADVNRMHQASAELQESVNALIDKNKNP
VQGAAAKRNEDGIKQKLEKKEGLFRKNMMGKRVNYAARSVISPDPNIETNEIGVPPVFAK
KLTYPEPVTSHNFRDMQQAVINGVDKWPGAFAIENENGQIVNLRNKSVDDRVSLANQLLA
PTSSNAARTRNKKVYRHLTNGDVVLMNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNT
YNADFDGDEMNMHFPQNEVARAEALQIADTDHQYLSGTAGKPLRGLIQDHISVSVALCNR
DTFFTKGDYQQLVYNALRPESGHIVGERIELVAPAVIRPVARWTGKQVITTILKNMQPPN
CGGLSMKAETQIKASQWGVNSEEGTVVFQDGEFIAGILDKSQIGPSSGGVIHAVHEIYGP
AVAGKLLSSLGRLLTRYLNMRAFSCGMDDLRLTPEGEQARREALVPADSVGLKVASSYVS
LEQDPGPRDPLLLERLEEVLRDDSKQEGLDLLMKEGLSKITDKIQTATMPVGLEKAFPFN
QMQAMTTSGAKGSRVNASLISCNLGQQVLEGRRVPIMVSGKSLPCFNPFETHARAGGYIV
QRFLTGIRPQEYYFHHMAGREGLIDTAVKTSRSGYLQRCVIKGMEGLTVAYDTTVRDADG
SMIQFLYGEDGLDVSKQKYLTDFSFILENVTSEASQLRYDPSVGDRLGMHRDAITKYMKK
ALKHTNIKDPKAQDPISGLFNPATTAFATSENFYKAMTSYIKENKDGLVRDKSDKNKLAL
SRVSLNKKNAEMLFAMKYLRSLVEPGEAVGIVAGQSVGEPSTQMTLNTFHLAGHSAKNVT
LGIPRLREILMTASDKISTPAMSIYPIEEMSVEDAEIFAKSISVLPLGFILDSINVEEKV
GQGKIYGSAKIYKVDIQFFDSEEYTKTYAINISDVVEAVERKLLHRLLALVKKDIRKRMT
MSTMATPDVGAKAGVVETAAPNAEAAGNFDDDEDDEDGDDDATNAKQRAKRSEAVSYGPN
DDDDDAVQQEMERDAGDDDADEDEDFGGSPQQAEGDGDGDDVDWSAKARTNRVLEQYAEV
IDFSFDEKTGASCSFTLEYDSTIPKVLMLNLVQDAVRKTVIQEISGVGACTLVEEKDTKV
IHTAGVNLQAMQRYSDFIDPNRIQTNDIAAVLAVYGVEAARQNIVQELAGVFGSHGIKVD
NRHLNLIGDHMTRNGGFTPFNRMGLKGNVSPFTKMSFETTLAFLKDAVLDGDWDDLSTPS
GRLVMGRLGKVGTGGFDVLAQLPTYHVDSLA
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcacaaccggtcgcgtccggggtagagagcgtcgagtttacgttcttgtcg
ccaaaggaaatccgagcaatctctgtcaagcgaattgagaatcccgaaaccttcgacaac
cttctcaatcctgtaccaggcggtctctatgaccctgccctcggatcatggggcgatgcg
ccgctacatgtattcatggaccaagcttatcgactcctgaaagctgcctgcgtctactgc
aaaggattccgacttcctcagaaagaactacacaagtatgtgtgccaactaaaacttctt
cagcacggcttgattcaggaggctcacgtagtgggtgccattggcgataacgagctggcc
atcgagctcggggacttctctgaattggaaagtgaagctgaggaggagggcggcaccaac
tcgatcgataacgtaacacgcgcaagagacaagtacgttgacaagtgtcttagcggtatc
aagatcaagagaggcgacacaaagagaggaaaacacgagggatcgagcgaaatgcgtcgt
gagattattaaggagtttctggcagaaatcaccaagcgcagagtttgcgctagctgtggt
ggcatttcaccttcataccgcaaggatcgatttgttaaagtttttgagagatcactatct
gataaggacaaggccaagatggctcagaagaatttcaagcaggccgatgctatggccagg
gtccaccaagctgcaaccaaacagaagcccgatggatactcatccgacgagggcgttgca
gatgtggcttctcctactcgtgagacttcccgcgttaatggagatgtcacggatcaggac
acggagatgatagatgcggacacggcttctacttcttcttctccacagcggtatatcagc
gccatggaggttcgagctcgactcaacgagttgttcaccaaggagcaagaattggtttcc
ctcctatacaacgcgaagcccccgacccgcagctctactaatgtcacgcccgacatgttc
tttttgacaaccatcctagttcctcccaaccgctaccgccccgaagctcgaacaggcgag
tccgagatttctgaagcccagcaaaattctctttacaaaaatattctcagaggctgtgga
acgatcgcgcgtctacacagggagttacaggaggaaaaagccgatgtcaacaggatgcat
caggcctcagcagagcttcaagagtcggtcaacgcgctcatcgataagaataaaaacccg
gttcaaggtgctgcagcgaagcgcaacgaggatggcatcaagcagaagctcgagaagaag
gaaggtctcttccgaaagaacatgatgggtaagcgtgttaactacgccgctcgaagtgtc
atctcacccgatcccaatatcgagaccaacgaaatcggtgtgccacctgtctttgcgaaa
aagttgacgtatcccgagccagtgaccagtcacaacttcagagacatgcaacaagctgtc
atcaacggtgtcgacaaatggcctggcgctttcgccatcgagaatgaaaatggccagatc
gtcaaccttcgcaacaaatcagtcgacgaccgtgtgtctctcgcaaatcagctactggct
cccacaagcagcaatgctgctaggacccggaacaagaaagtctaccgccatctgaccaat
ggcgatgttgtcctgatgaaccggcagccaacacttcacaaaccgtctattatgggacat
cgagttcgagttctccctggcgagaagacgattcgaatgcactacgccaactgtaacaca
tacaacgctgatttcgatggtgatgagatgaacatgcatttcccgcagaacgaagttgcc
cgcgccgaagccctccagattgccgacactgatcaccaatacctatctggtactgcgggg
aaacctctccgaggtctcattcaggatcatatctcggtatccgttgctctctgtaaccgc
gacacattcttcaccaagggcgactatcaacaactggtttacaacgcattgcggcccgag
agtggccacattgttggcgagagaatcgaacttgttgcccctgcagtgatccgacctgta
gctcgatggactggcaagcaggtcatcaccaccatcttgaagaacatgcagcctcccaac
tgcggcgggctttccatgaaagcggaaacgcaaatcaaagccagtcagtggggtgttaac
tctgaagaaggaactgttgtttttcaggatggcgaattcatcgccggtattctggataag
tcacagattggtcccagctctggtggtgtcatccacgctgttcatgagatttatggcccg
gctgttgcgggtaagctcttgagtagtctcggtaggttgctcacgaggtatctcaacatg
agggctttctcctgtggtatggatgatttgagacttacgcctgagggagagcaagcccgg
cgagaagcgcttgtgcctgccgactcagtgggtctcaaagttgcatcttcctacgtttct
ctcgagcaggacccaggtcctagagatcctctgctattggagcgtctggaagaggtactt
cgcgacgacagcaaacaagaaggtctggatcttctgatgaaggaaggtcttagtaagatc
acggacaagatccagacagctaccatgcctgttggtctcgagaaggctttccccttcaac
cagatgcaagccatgacaacatccggtgccaagggatccagagtcaatgcctcgctgatt
tcttgcaaccttggtcagcaggttttggagggtcggcgtgtccctatcatggtcagcggc
aagtcattgccatgctttaacccattcgagactcatgctcgagctggcggttatatcgtg
cagcgcttccttacagggatccggcctcaagagtactatttccatcacatggccggtcga
gaaggtctgatcgatactgctgttaagacgtcccgctccggttacctacagcgatgtgtt
atcaagggtatggagggtttgacggtcgcgtacgataccaccgtgcgagatgcagatggc
tccatgatccagttcctgtacggcgaggatgggctcgatgtttccaagcagaagtatttg
actgatttcagcttcatcctggagaacgtcacatcagaggcttcacagctccgttacgac
cccagcgttggcgaccgcctaggaatgcaccgcgatgcaatcaccaaatacatgaagaag
gctctcaagcacaccaacatcaaagatcccaaagctcaggacccgatctcaggtctcttc
aaccctgccacgaccgcgttcgccacatctgagaacttctacaaggccatgacttcatac
atcaaggagaacaaggatggccttgtccgggacaaatcggataagaacaagcttgcgctc
tctcgtgtgagcctcaataagaagaatgcggagatgctgttcgcgatgaaatacttgcgg
tctcttgtggagcctggagaagctgtcggtatcgtagcgggtcagtctgttggtgagcct
tcgacgcaaatgacattgaacaccttccatttggctggtcactctgcaaagaacgtcacg
ctgggtatccctcgactgcgtgagattctcatgacagctagcgacaagatctccacccca
gccatgtctatttacccaatcgaggagatgtctgtagaagatgcagagatctttgccaag
tccatctcagtgttgcctcttgggttcattctcgatagcatcaacgttgaagagaaggtt
ggtcaaggcaagatttacggttcggccaagatttacaaggtcgatatacagttcttcgac
tcggaggagtacaccaagacatatgccatcaatatctcggacgttgtcgaggctgttgag
aggaagctcctccaccggctactggctcttgtgaagaaggacatcaggaagcgaatgaca
atgtctacaatggccactcccgatgttggcgccaaggctggtgttgtggagacggctgct
cccaatgctgaagctgccggcaatttcgatgatgatgaagacgatgaggatggtgatgat
gacgcgacgaatgccaagcagcgagccaaacgaagcgaggcagtgtcgtatggacccaac
gatgatgacgacgatgccgtgcagcaggaaatggagcgggatgccggtgacgatgatgct
gatgaggatgaagatttcggtggcagcccccagcaggcggaaggtgacggggatggtgac
gatgtcgactggtctgcaaaggcacgaaccaaccgggtccttgaacaatacgccgaggtt
atagacttctcgttcgacgagaagacgggagccagctgcagtttcacactggagtacgat
tcaactattcccaaagtcctcatgctcaacctcgttcaagacgctgtgaggaagacggtg
atccaggagatttctggcgtcggtgcctgcacccttgtcgaggagaaggacacaaaggtc
atccatacagcgggtgtgaacctgcaggcaatgcagcgatacagcgatttcatcgacccc
aaccgcatccagaccaacgacatcgctgccgtactggccgtgtacggtgttgaagcagct
cgccaaaacatcgtgcaagaacttgccggcgtcttcggatctcacggcatcaaggtggac
aaccgccacctgaacctgatcggagaccacatgacgagaaatggtggattcacacctttc
aaccgaatgggtctgaagggtaacgtcagccccttcactaagatgagtttcgagacgacg
ctcgcattcctcaaggacgctgtgctggatggtgattgggacgatctgtctacgcccagt
ggtcggctggtgatgggtagacttggaaaggttggcacaggtggcttcgatgttttggcg
caacttcccacatatcatgttgattctttggcgtaa
DBGET
integrated database retrieval system
