Fusarium oxysporum: FOXG_15416
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Entry
FOXG_15416 CDS
T04882
Name
(RefSeq) DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
fox
Fusarium oxysporum
Pathway
fox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FOXG_15416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_15416
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FOXG_15416
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
AAA_27
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
28956474
NCBI-ProteinID:
XP_018255386
UniProt:
A0A0J9W3A2
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Position
5:671485..675984
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AA seq
1211 aa
AA seq
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MASQRSTAARTPAKATKPAATTSSAKQRSIVSFFQKAPPSSPAAAASSPLAKASPTAKQS
SCLKETTKANSLPKTTPLSKSKPKPTVAIKQTTPVPDSDAIEPPSSQENLDSAMKKSSKM
NHDALPSSPTRKVKKVVSYAESSEEDEPFQFGGPASSRRRARVRQVVRDEDDYEEQEEEE
AEENDSDTMDDFIASDSDEDTSRSKKRKRPSKPTAPRKRSNKSSPIPEPHIDIKDSILEE
DELMDDVGGSTASQWSYDATSTDKQPVVKPAERVALRDPKYKEKAHTKDPDQRYPWLANI
MDKDKRKPDHPEYDKRTIYIPPAAWQKFSPFETQYWKIKQNLWDTIVFFKKGKFYELYEN
DATVGHQEFDFKMTDRVNMRMVGVPESSLDHWVNQFIAKQYKVARVDQMETNLGKEMRER
QDKSKKADKVITRELACILTAGTLVDGSMLQDDMASYCVAIKESVVDDLPAFGIAFADTA
TGRFYLSTFVDDVDLTKFETLIAQTGPRELLLEKSRMSTKALRILKNNTSPTTIWTHLKP
GDEFWEADKTRRELDCGGYFKAEDADEEVWPEILQSLRDDDLAMSATGALISYLRFLKLE
RPLLSQGNFELYNPIQKNGTLILDGQTLINLEVFSNSVNGGSEGTLFSLLNKCVTPFGKR
LFRSWVAHPLCNIDRINERLDAVEMLNADQTVREQFASQLVKMPDLERLISRIHAGACKP
EDFVKVLEGFEQIEYTMSLLGAYKGGNGLVDRLISSMPNLDEPLSYWRSAFDRSKARDEK
LLIPERGIEEDFDQSSDRIEEIKQQLEDLLAEKKKEFKCKLLKFTDVGKEIYQLEAPKSV
KVPSTFRQMSATKDVKRWYFPELSQLVRELQEAEETHSQLVREVASRFFQKFDVDYETWL
QAIKIISQLDCLVSLAKASASLGQPSCRPEFVDEERSTVDFQELRHPCMMNTVDDFIPND
IKLGGDQAKINLLTGANAAGKSTVLRMSCVAVIMAQIGCYVPATFARLTPVDRIMSRLGA
NDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHI
GCVGYFATHYHSLATEFENHPEIRARRMQIHVDDEERRVTFLYKLEDGVAEGSFGMHCAA
MCGISSRVIDRAEVAAKEWEHTSRLKDSLEKAKTGCYIPLGILSDIGALLGDKGEMGDAG
VDVLLNAIEAL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccaacgatcaactgcggcccgaacgcccgctaaagcgactaaaccggctgcc
actacttcttcagccaagcagcgttcaatcgtttctttcttccaaaaagcgcccccctct
tcccccgccgctgccgcatcatcgcctcttgcaaaagcgtctcccacggccaagcaatcc
tcgtgcttgaaagaaacaacgaaggcaaattctttgccaaagacaactccgctctccaag
tccaagcccaagccaactgtcgccatcaagcaaacaacccccgtccctgatagtgacgct
attgagccccctagctcccaggagaatctcgattcggccatgaagaagtcctccaagatg
aaccacgacgctctccccagcagtccgactcgaaaggtcaaaaaggttgttagttacgcc
gaatcctcagaggaagacgagcctttccagtttggcgggcccgcaagctcgcgtcgaaga
gcgagagtacgacaggttgttagggatgaggacgattacgaagaacaagaggaggaagag
gcagaggagaacgatagtgatactatggatgactttatcgcatcagactcagacgaagat
acctctcgttccaagaagcgaaagcgaccctcaaagcccactgctccccgaaaacgatcg
aacaagtcatcgcctatacctgaaccccatatagatatcaaggatagcattcttgaagaa
gatgagctgatggatgatgtgggaggctctacggcctcgcaatggagctacgatgccacc
tctaccgataagcagccggtagtcaagcccgctgagagggtggctttgagggaccctaag
tacaaggagaaggcacacaccaaagatcccgaccaaaggtatccttggcttgccaatatt
atggataaagacaagcgaaagcccgatcatcccgagtatgacaagcgaacaatttacatt
cctcctgctgcttggcagaagttctctcctttcgagactcaatactggaagatcaagcag
aacctttgggatacaattgtcttcttcaagaagggcaagttttacgagttatacgagaac
gatgccaccgtaggacatcaggagttcgacttcaagatgacagaccgggtcaacatgcgc
atggttggagtgcctgagagttcgctcgatcactgggtgaaccagtttatcgccaaacaa
tacaaggttgctcgtgttgatcagatggagacaaacttgggtaaagagatgcgcgagcga
caggataagagcaagaaggccgacaaggtcatcacccgtgagcttgcttgtatccttaca
gccggaacacttgtcgacggtagcatgttgcaagatgacatggcctcctactgtgtcgct
atcaaggaatctgtcgttgacgatctccctgcttttggtatcgcctttgctgacactgct
actggacgtttctacctttctacctttgtggatgatgtggatttgaccaagtttgagacc
ctcatcgctcaaaccggcccccgagaactacttcttgagaagtctcgcatgtctaccaag
gcactgcgtatcctcaagaacaatactagcccaaccaccatctggacacacctcaagcca
ggtgacgagttctgggaggcggataagacccgtcgcgaactcgactgtggaggctacttc
aaggcagaagatgctgacgaggaggtctggcctgaaattcttcaatcgctacgcgatgat
gatttggccatgtcggcaactggagcattgatctcatacttgcgcttcctcaagcttgag
agacctttactgtcgcagggcaacttcgagctctacaaccccattcaaaagaatggaaca
ctgatcctagatgggcagacgctcatcaacctcgaagtcttctccaactcggtcaacggc
ggttccgagggtacgttgttcagcctacttaacaagtgcgtcacgccctttggaaaacgt
ctcttccgatcatgggtcgcgcacccgctttgcaacatcgatcgcatcaacgagcgtctc
gatgctgtcgagatgctcaatgccgatcagacggtacgtgaacaattcgcctcacagctt
gtcaagatgcccgacttggagcgactcatctcccgaattcacgctggggcttgcaaaccc
gaagattttgtcaaggtcctggaaggctttgagcagatagagtataccatgagccttctg
ggagcttacaagggtggtaacggcctcgtcgaccgcttgatttcatcgatgccaaacctc
gatgagcctttgagctattggagatcagctttcgatcgcagcaaggcacgcgacgagaag
ctacttattcctgagcgcggtattgaagaggatttcgaccagagttctgatcgcattgag
gagattaagcagcaactcgaagatctcttggccgagaagaagaaggagttcaagtgcaag
cttctcaagttcacagacgttggtaaagagatctaccagctggaagctcccaaaagcgtt
aaggttccttcaacctttcgccaaatgtcagcgacaaaggatgtcaagcgctggtacttc
cccgaactatcccaacttgtgcgagagcttcaagaagcggaagaaacccactcacagctc
gtacgcgaagttgcgtcgcgattcttccaaaagtttgatgttgactatgaaacatggctg
caagccatcaagattatctcgcagctggattgtcttgtcagcttagccaaggcatccgcg
tctcttggccagccaagttgccgcccagagtttgtggatgaggagcgaagcactgttgac
ttccaagaactgcgacatccttgtatgatgaacacagtcgacgacttcattcccaatgac
attaagcttggtggtgaccaggctaagatcaacttattgactggagccaacgctgccggt
aaatctaccgtccttcgcatgtcttgcgtcgccgtcatcatggctcagattggctgctat
gtccctgccactttcgcacgcctcactcccgtcgatcgcatcatgtctcgtctcggcgcc
aacgacaacatcttcgccgctcaatcgaccttctttgttgagctttccgagaccaagaag
atcctttccgaagccacaccccgatcattggtcattctggatgaacttggtcgtggaacc
agctcttacgatggtgtcgccgtcgcccaggctgttctgcatcacgtcgctactcacatt
ggctgtgtcggttacttcgccactcactaccactctctcgcgacagagtttgagaaccat
cccgagatccgagcacgaaggatgcagatccacgttgatgacgaggagcgtcgcgttacc
ttcttgtacaagctggaagatggtgtcgccgagggtagtttcggtatgcactgcgccgct
atgtgcggtatctcatcacgcgtgatcgaccgcgcagaagtcgctgccaaggaatgggag
cacaccagccgtctcaaggatagtcttgagaaggcaaagacagggtgttacatcccgctt
ggtattctcagcgacatcggtgcactgcttggcgataaaggcgagatgggagacgcgggt
gtggatgttcttcttaatgctatcgaggcattgtaa
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