Flavobacterium pallidum: HYN49_08515
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Entry
HYN49_08515 CDS
T06077
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fpal
Flavobacterium pallidum
Brite
KEGG Orthology (KO) [BR:
fpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpal03009
]
HYN49_08515 (rimO)
Enzymes [BR:
fpal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HYN49_08515 (rimO)
Ribosome biogenesis [BR:
fpal03009
]
Prokaryotic type
ribosomal protein modification factors
HYN49_08515 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AWI25939
UniProt:
A0A2S1SHU6
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All DBs
Position
complement(2084598..2085914)
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AA seq
438 aa
AA seq
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MRTKSLKKNKINVITLGCSKNIYDSEVLMGQLRASGKEVQHEAPEKEEGNIIVINTCGFI
DNAKAESVNMILEYADKKDRGLVDKVFVTGCLSERYRPDLEKEIPNIDQYFGTTELPLLL
KALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHVSQPIEKLVKEA
QTLAKDGVKELILIAQDLTYYGLDLYKKRNLGELLEALVKVEGIEWIRLHYAFPTGFPMD
VLEIMKREPKICNYIDIPLQHISDQVLKSMRRGTTQEKTTKLLKDFREAVPGMAIRTTLI
VGYPGETQEDFEKLKDFVQEMKFDRLGCFAYSHEENTHAYLLEDDVPDEVKQQRANEIME
LQSQISWDLNQEKVGQSFKCIIDRKEGGHFVGRTEFDSPDVDNEVLIDATKHYVKTGDFV
MVKIIEATEFDLYGEPVN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcggactaagtctttaaaaaagaacaaaataaatgtcattacccttgggtgttccaaa
aatatctacgacagtgaagtgctgatgggccagctgcgcgcaagcggaaaggaagtgcag
catgaagcgcctgaaaaggaagaaggcaatatcatcgtgatcaatacctgcggatttatc
gataatgcaaaggcggaatcggtgaacatgattttggaatatgccgataagaaagaccgc
ggattggtagacaaagttttcgttacaggctgtctttctgagcgttaccgtcctgattta
gagaaagaaatcccgaatatcgaccagtatttcggaacgaccgagttgccgttgttactc
aaagcgcttggtgctgattataagcatgaattgctgggtgaaaggcttactaccactccg
aaaaactacgcttatttaaaaattgccgaaggttgcgaccgcccttgcagtttttgcgcg
attccgctgatgcgtggtaaacacgtttcacagccgattgaaaaactggtaaaagaagct
cagacattggccaaagacggcgtaaaagaattaatattgattgcgcaggaccttacgtat
tacgggcttgatttgtataagaaaaggaatctgggtgagcttctcgaggccttggtgaag
gtggaaggaatcgaatggatccgccttcattacgcgttcccgaccggtttcccgatggac
gtactcgaaatcatgaaacgcgagccgaaaatctgcaattatattgatattccgctgcag
cacatctcggatcaagtattgaaatcgatgcgacgcggcacgacacaggaaaaaacaacg
aaattactcaaggatttccgtgaagctgttccgggaatggccatcaggacgacgttgatc
gtaggatatccgggtgaaacacaggaagattttgagaaacttaaggatttcgtgcaggaa
atgaagttcgaccgtttgggttgttttgcctattcacatgaggaaaacacacatgcttat
ttactcgaagacgatgtccctgacgaagtaaaacagcaacgcgcgaatgaaatcatggaa
ctgcagtcgcaaatctcctgggacctgaaccaggagaaagtgggccagtcgttcaaatgc
attattgaccgcaaagaaggcgggcatttcgtaggccgtactgaatttgacagcccggat
gtcgacaatgaagttttaatcgatgccaccaaacattatgtaaagacgggtgatttcgtc
atggtgaaaatcattgaagccacagaattcgatttgtatggggaaccagttaactga
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