Flavobacterium panici: NLJ00_24360
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Entry
NLJ00_24360 CDS
T08520
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fpb
Flavobacterium panici
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpb03009
]
NLJ00_24360 (rimO)
Enzymes [BR:
fpb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NLJ00_24360 (rimO)
Ribosome biogenesis [BR:
fpb03009
]
Prokaryotic type
ribosomal protein modification factors
NLJ00_24360 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
DUF5005
Motif
Other DBs
NCBI-ProteinID:
UUF14381
LinkDB
All DBs
Position
5822460..5823770
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AA seq
436 aa
AA seq
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MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLRANGKEVTHEATKDEGNIIVINTCGFID
NAKAESVNMILEYADKKDKGLVDKVFVTGCLSERYRPDLEKEIPNVDQYFGTTELPQLLK
ALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHVSQPIEKLVKEAQ
GLAKNGVKELILIAQDLTYYGLDLYKKRNLAELLEALAAVEGIEWIRLHYAYPTGFPMDV
LELMKREPKICNYIDIPLQHISDSILKSMRRGTTQAKTTQLLKDFRAAVPGMAIRTTLIV
GYPGETQEDFEILKDFVQEMKFDRMGCFAYSHEENTHAYLLEDNVPDDVKQARANEIMEL
QSQISWDLNQEKVGQVFRCIIDRKEGAHFVGRTEFDSPDVDNEVLIDASKHYVKTGEFVN
IKIIEATEFDLYGEPA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaagtctttaaaaaagaacaaaattaacgtaatcactcttgggtgttcaaaa
aatgtatatgatagtgaagtacttatgggtcagcttcgtgcaaacggaaaagaagtaact
catgaggctactaaggatgaaggaaacattattgtaattaacacttgtggctttattgat
aatgcgaaagcggaatcagtaaacatgattttggaatatgcagacaaaaaagacaaagga
ttagttgataaagtttttgtaaccggatgtttatctgagcgttacagacctgatttagaa
aaagaaatcccaaatgttgatcaatattttggtactactgaattacctcaattattgaaa
gctttaggagctgattataaacatgaattattaggagaaagattgactacgactcctaaa
aactatgcttacttaaaaatagctgaaggatgcgacagaccttgcagtttttgtgcaatt
ccgttgatgcgtggttctcacgtttcgcagccaattgaaaaattagttaaggaagcacaa
ggtttagctaaaaatggcgttaaagaattaatactaattgctcaggatttaacgtattac
ggtttagatctttataaaaagagaaatctggcagaattgttagaagctttagcagctgtt
gaaggaattgagtggattcgtttgcattatgcttatcctactggtttcccaatggatgtt
ttggaattaatgaagcgagaacctaagatttgtaattatattgatattccgttgcagcat
atttcagattcaattttgaaatcgatgcgtcgcggtacaactcaggctaaaacaacacaa
ttattaaaagatttccgtgctgctgttcccggaatggcaattagaactactttaattgtt
ggatatcctggtgaaacgcaggaagatttcgaaatcttaaaagattttgttcaggaaatg
aagtttgacagaatgggctgttttgcttattctcatgaagaaaatacacatgcttattta
ttagaggataatgttccggatgatgtaaaacaagcaagagcaaatgaaatcatggaatta
caatcgcagatttcatgggatttgaaccaagagaaagttggacaagtttttagatgtatt
attgacagaaaagaaggtgctcattttgtgggaagaacggagtttgacagtccggatgtt
gataacgaagttttaatagatgcgtctaaacattacgtaaaaacaggcgaatttgttaat
atcaagataattgaagcaacagaatttgatttatacggagaacctgcttaa
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