Frankia casuarinae: Francci3_3855
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Entry
Francci3_3855 CDS
T00320
Name
(GenBank) succinyldiaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
fra
Frankia casuarinae
Pathway
fra00300
Lysine biosynthesis
fra01100
Metabolic pathways
fra01120
Microbial metabolism in diverse environments
fra01230
Biosynthesis of amino acids
Module
fra_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Francci3_3855
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fra01002
]
Francci3_3855
Enzymes [BR:
fra01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Francci3_3855
Peptidases and inhibitors [BR:
fra01002
]
Metallo peptidases
Family M20
Francci3_3855
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ABD13205
RhizoBase:
Francci3_3855
UniProt:
Q2J687
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All DBs
Position
complement(4619021..4620100)
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AA seq
359 aa
AA seq
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MSLDLTAPVGELTRALVDVPSVSGDEAALAGAVEKALTAVDGLRVDRDGDAVVARTELGL
PGRILLAGHLDTVPLAGNLPSRVVGGRLYGCGTSDMKAGVAVALRLAATLPVATPGAMSH
DVTWVCYDHEEVEAARNGLRRLAARHRDWLDADLAILMEPTSGEIEAGCQGTLRVVVTLP
GTRAHSARSWLGDNAIHKAGDLLRRLAGYRARTVTLDGCTYREGLCAVRIDGGVAGNVIP
DRCQVTVNFRFAPDRGPDEAVAHVREVLGGYDVEVTDLVGGALPGLAAPHAAAFVAATGR
VPVAKYGWTDVARFAELGIPALNYGPGDPNLAHARDEYVELAAIDEAERLLRAYLSGVS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgacctcacggcgcccgtcggcgagctgacccgggcgctggttgacgtgccc
tcggtgagtggggacgaggccgccctcgcgggcgcggtggagaaggcgctcaccgcggtg
gacgggctgcgggttgaccgggacggtgacgccgtggtggccaggaccgagctggggctg
cccggccggatcctgcttgccggccatctggacaccgttccgctggcgggcaacctgccc
tcgcgtgtggtgggcgggcggctctacggctgcgggacgtcggacatgaaggcaggggtc
gcggtcgcgctgcggctcgcggccacgctcccggtcgccacgcccggcgcgatgagccac
gacgtcacctgggtctgctatgaccacgaggaggtcgaggcggcccgcaacgggctgcgt
cggctcgccgcccggcaccgggactggctggatgcggatctggccatcctgatggaaccg
acctccggcgagatcgaggcgggttgccagggcaccctgcgggtggtcgtgacgcttccc
ggcacccgggcgcactcggcccggtcgtggctcggggacaacgccatccacaaggccggc
gatctgctccgccgcctcgccggctaccgggcgcggacggtgacgctggacggctgcact
taccgtgaggggctctgcgcggtgcggatcgacggtggggtggcgggcaacgtgatcccc
gaccggtgccaggtcacggtgaacttccggttcgctccggaccggggccccgacgaggcg
gtggcgcatgttcgcgaggtgctgggtggctacgacgtcgaggtcaccgatctcgtcggc
ggggcgctgcccgggctcgccgccccgcacgcggcggcgttcgtcgccgccaccggtcgt
gtgccggtggcgaagtacggctggacggacgtggcgcgcttcgccgagctcgggatcccg
gcgctcaactacgggccgggcgatcccaacctggcccatgcccgggacgagtacgtcgag
ctcgccgcgatcgacgaggccgagcggctgctacgggcgtacctgtccggtgtctcctga
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