Parafrankia sp. EAN1pec: Franean1_6078
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Entry
Franean1_6078 CDS
T00608
Name
(GenBank) thiamine pyrophosphate protein domain protein TPP-binding
KO
K00175
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:
1.2.7.3
1.2.7.11
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre00010
Glycolysis / Gluconeogenesis
fre00020
Citrate cycle (TCA cycle)
fre00620
Pyruvate metabolism
fre00650
Butanoate metabolism
fre01100
Metabolic pathways
fre01110
Biosynthesis of secondary metabolites
fre01120
Microbial metabolism in diverse environments
fre01200
Carbon metabolism
fre01210
2-Oxocarboxylic acid metabolism
Module
fre_M00009
Citrate cycle (TCA cycle, Krebs cycle)
fre_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Franean1_6078
00020 Citrate cycle (TCA cycle)
Franean1_6078
00620 Pyruvate metabolism
Franean1_6078
00650 Butanoate metabolism
Franean1_6078
Enzymes [BR:
fre01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
Franean1_6078
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
Franean1_6078
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Gene cluster
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Motif
Pfam:
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
ABW15422
RhizoBase:
Franean1_6078
UniProt:
A8LC85
LinkDB
All DBs
Position
7397810..7398871
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AA seq
353 aa
AA seq
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MTVTTNGSGITNRLLDLVPATPSQLSRKDFTSDQEVRWCPGCGDYAILATVQGFLPELGI
ARENIAFISGIGCSSRFPYYLQTYGMHSIHGRAPAIATGLATSRPDLSVWVVTGDGDALS
IGGNHLLHAMRRNVNIKILMFNNRIYGLTKGQYSPTSEVGKITKSTPFGSLDRPYNPASL
ALGAEATFVARSIDSDRAHLTSVLRAAAEHPGTAFVEIFQNCNIFNDGAFEALKDRGTRD
DATLKMIDGEPLVFGAERDKGIRRSASGGLEVCAATDEGVIVHDAASTDPSQAFALSRLT
GDDHGVTPIGVFRNVDIPTYDEALNAQVEQTRERQGTGDLMALISGGETWTIS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcacaacgaacggcagcgggattaccaaccgactcctggacctggtacccgcc
acgccgagccagctgagccgtaaggacttcacctccgaccaggaggtccggtggtgcccg
ggatgcggcgactacgccatcctggccaccgtccagggcttcctgcccgagctggggatc
gcccgggagaacatcgccttcatctcgggcatcgggtgctcctcacgcttcccgtactac
ctgcagacctacgggatgcactccatccacgggcgggcgccggcgatcgcgacgggcctg
gcgacgtcccgcccggacctgtcggtctgggtggtcaccggtgacggcgacgcgctctcg
atcggcgggaaccacctgctgcacgcgatgcgccgcaacgtgaacatcaagatcctgatg
ttcaacaaccggatctacgggctgaccaagggccagtactccccgacgtccgaggtcggc
aagatcaccaagtcgacgccgttcggctcgctcgaccgcccgtacaacccggcgtcgctg
gcgctgggcgcggaggcgacattcgtcgcccggtcgatcgactcggaccgggcccacctg
acgtcggtgctgcgcgcggcggcggagcacccgggcaccgcgttcgtggagatcttccag
aactgcaacatcttcaacgacggtgcgttcgaggcgctgaaggaccgcggcacccgcgac
gacgccacgctgaagatgatcgacggcgagccgctggtcttcggcgccgagcgggacaag
ggcatccggcgctcggcgtccggcggcctcgaggtctgcgcggcgaccgacgagggcgtc
atcgtgcacgacgcggcgagcacggacccgagccaggcgttcgcgctgtcccggctgacc
ggggatgaccacggcgtcaccccgatcggcgtgttccgcaacgtcgacatcccgacctac
gacgaggcgctcaacgcgcaggtcgagcagacccgggagcggcaggggacgggggacctc
atggccctcatctccggcggcgagacctggacgatcagctga
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