Pseudofrankia inefficax: FraEuI1c_5656
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Entry
FraEuI1c_5656 CDS
T01354
Name
(GenBank) glycoside hydrolase family 2 TIM barrel
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00052
Galactose metabolism
fri00511
Other glycan degradation
fri00600
Sphingolipid metabolism
fri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
FraEuI1c_5656
09103 Lipid metabolism
00600 Sphingolipid metabolism
FraEuI1c_5656
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
FraEuI1c_5656
Enzymes [BR:
fri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
FraEuI1c_5656
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Motif
Other DBs
NCBI-ProteinID:
ADP83640
UniProt:
E3IUF5
LinkDB
All DBs
Position
complement(6937288..6940347)
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AA seq
1019 aa
AA seq
DB search
MTATSFTAMPWDGSGFHAVRRLPMHGLRRPADVELDGAWEFQLLPSPTAPVGDVWKTVDV
PGLWTMSETDDRPHYTNVAMPFDEVPPQIPARNPTGVYRRSFALRPDPGRQVILRIGAAE
GLLRAFVNGHAVGISTDSHLAAEFDITDACVAGPDGEHTVELVVSKWSSVSYLEDQDQWW
HAGLSRSVSVHTVPRTRLADLKVHADYDPAAQRGGLRLRVSTAGLDGLRDEGWTVEVEAL
GERSTAPVAPLRDAPRLPALTGDRSVRPPRLIPPDLMDLPSLLAADAPIPADWAPAAAMM
GPSLRPLPVAGTAVLDRADLDVRPWSAESPHLYDVIVRLADPDGRIVDETTTRVGFRRVT
IEGRDLLVNGRRVLVQGVDRHDVDPATGRVMRPERLLAELSLLKRFNVNAIRTSHYPNDP
LFLDLCDEIGFYVVDEADIEAHAFSSALCDDPRYLPAFLDRVSRMVLRDRNHPCVIIWSL
GNETGYGANHDAAAAWVRRFDPTRPVQYEGAIASDWHGGHPSTDLVCPMYPSFESLAAYS
ADPRADRPLILCEYAYSQGNSNGGLAEYWAMFETLPGLQGGFIWEFTDHALDPDGDGRYR
YGGDFGDVPNDGIALLNGIAFPDLTPKPALYEARGLFSPVRIVSDAAAALAGTISVRNRQ
VFNDLGAFTFELQVEDGGESGPVTVDMPDVPAGTTGTLRIPEVVRARLEASSPLAVTLTV
RTRADTRWAPAATVIAAHQVVFERPAEPVAAPVPARLPVGEDGELAHPLLRTGPRLCLWR
ALTDNDRSFALDQRFVRSGFFQLTPRQVEIRPDGEGAAVTTRYATAFDTEVVHHRTIAAL
TPPDHPYTEYLLRERVVLPDDTEDALRVGVVFELCDGFDEARWVGLGPWENYPDRRSSAL
LGAWHSRIDDLAVPYLFPQENGGRGQTTELRLTGPAGTVSTFHQSPLHMTVRRHRVEELE
AASHWWELPPSAATVVHLDVAHRGLGTAVLGPDTRPRFRLPDREYAWTWRLRLDERPPR
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaccagcttcaccgccatgccgtgggacggctccgggttccacgccgtaaga
cggctgccgatgcacgggttgcggcggccggctgacgtcgagctcgacggggcgtgggag
ttccagctgctgcctagcccgacggcaccggtcggtgacgtctggaagacggtggacgtc
cccgggctctggacgatgtccgagaccgacgaccggccgcactacacgaacgtcgcgatg
ccgttcgacgaggtgccgccccagattccagcgcgcaatccgaccggggtctaccggcgc
tccttcgcgctgcggcccgaccccggacggcaggtgatcctgcggatcggggccgccgag
ggcctgctgcgggcgttcgtgaacgggcacgcggtcgggatcagcacggactcgcacctc
gccgcggagttcgacataaccgacgcctgcgtcgcgggcccggatggcgagcacaccgtt
gagctggtcgtctccaagtggtcatcggtctcctaccttgaggaccaggaccagtggtgg
cacgcgggcctcagccgctcggtgtccgtccacacggtgccacggacccggctggcggac
ctgaaggttcacgccgactacgacccggccgcccagcgcggcgggctgcgcctcagggtg
tccaccgcgggcctggacggcctgcgcgacgaaggatggacagtcgaggtcgaggcgctg
ggggaacgctcgacggcgcccgtggcgccgctgcgcgacgcgccgcggctgccagcgctc
acgggcgaccggtcggtccggccgcccaggctgatcccgcccgacctcatggacctgccc
tcgctgctggcggcggacgcccccatcccggcggactgggcgcccgcggccgccatgatg
ggtccatccctgcggccgttacccgtggccgggaccgccgtcctcgaccgcgccgacctc
gacgttcggccctggtcagcggagagcccgcacctgtacgacgtcatcgtccggctggcc
gacccggacgggcggatcgtcgacgagaccaccaccagggtcggattccgccgggtgacg
atcgagggccgcgacctgctggtcaacggccggcgcgtcctggtccagggggtcgaccgc
cacgacgtcgacccggcgaccggacgggtcatgcggccggagcggctgctggcggagctt
tcgctgctcaagcggttcaacgtcaacgccatccgcacgtcgcactacccgaacgacccg
ctgttcctcgatctttgcgacgagatcggcttctacgtcgtggacgaggcggacatcgag
gcgcatgccttctcgtcggcgctctgcgacgacccgcgctatctgcccgccttcctggac
cgggtgtcgcggatggtgctgcgcgaccgcaaccacccgtgcgtgatcatctggtcgctc
ggcaacgagaccggctacggcgccaaccacgacgccgcggcggcctgggtccgccgcttc
gaccccaccaggcccgtgcagtacgagggcgcgatcgcgtcggactggcatggcgggcac
ccgtcgaccgacctcgtgtgcccgatgtacccgtcgttcgagagcctcgccgcgtacagc
gccgacccgcgcgccgaccggccgctgatcctctgcgagtacgcgtactcccagggcaac
tcgaacggcgggctcgccgagtactgggcgatgttcgagacgcttcccgggctgcagggc
ggcttcatctgggagttcaccgaccacgccctggaccctgatggcgacggccgttaccgc
tacggcggggacttcggtgacgtccccaacgacgggatcgcgctgctcaacggcatcgcc
ttccccgacctcacgcccaagcccgcgctgtacgaggcgcgcgggctgttcagcccggtg
cggatcgtctccgacgccgccgccgcgctggccgggaccatcagcgtccgcaaccggcag
gtcttcaacgacctgggcgccttcacgttcgagctgcaggtggaggacgggggcgagagc
ggcccggtgaccgtcgacatgccggacgtccccgccgggacgaccgggacgctgcgcatc
cccgaggtggtgcgggcgcggctcgaagcgtcctcgccgctcgcggtcacgctgaccgtg
cggacgcgtgccgacacgcggtgggcgccggccgcgacggtgatcgccgcccaccaggtc
gtgttcgagcgccccgccgagcccgtcgcggcgcccgtacccgcgcggctccccgtcggc
gaggacggcgagctggcgcacccgctgctgcggaccggcccgcggctgtgcctgtggcga
gcactcaccgacaacgaccgctccttcgcgctcgaccagcgcttcgtgcgttccggtttc
ttccagctcacgccgcggcaggtcgagatccgcccggatggggagggcgccgcggtcacc
acgcgctacgccaccgcgttcgacacagaggtggtgcatcaccggaccatcgcggctctc
acgccacccgaccatccgtacaccgagtacctgctgcgcgagcgggtcgtcctcccggac
gacaccgaggacgcgttgcgggtcggggtggtgttcgagctgtgtgacggcttcgacgag
gcccgctgggtcggcctcggcccgtgggagaactaccccgaccgacgctcgtccgcgctt
ctcggcgcctggcacagccgtatcgacgacctcgccgtgccctacctgttcccgcaggag
aacggcgggcgtggtcagaccaccgaactgcgcctcaccggcccggctggcaccgtcagc
acctttcaccagtcaccgctgcacatgaccgtgcgccgccaccgcgtcgaggagctcgaa
gcggccagccactggtgggagctgccgccgagcgccgccacggtggtgcacctcgacgtg
gcgcaccgcggcctggggaccgcggtgctgggccccgacacccgcccgagattccggctc
cccgaccgtgagtacgcctggacgtggcgactgcgtctcgacgaacggccgccgcgctga
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