Fibrobacter succinogenes: FSU_2956
Help
Entry
FSU_2956 CDS
T02105
Name
(GenBank) radical SAM domain protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
fsc
Fibrobacter succinogenes
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsc03016
]
FSU_2956
Enzymes [BR:
fsc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
FSU_2956
Transfer RNA biogenesis [BR:
fsc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
FSU_2956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
ADL26467
UniProt:
C9RL35
LinkDB
All DBs
Position
complement(3416020..3417423)
Genome browser
AA seq
467 aa
AA seq
DB search
MIVVLSQGCAANFGDGEKIARILSQKSEVTFEFPEAKPAHSTNAENSTSAANLENAENST
SAENAADFRTEKPEAFYLNVCTVKGNAGAMKLLRKAASTFPGVPIYITGCAPKDFREEAL
RTVPHVQFTSLKELDASAILPTQSAQSPSSQINARTPDSNKASRNVLRESPFVGIVNIEE
GCLDACAFCSTHLVKGRLHSFAPQTIVDQVQALVDDGCLEIQLTGQDCACYGFDIGTNLA
ELTQRILTHVNGNYRIRLGMGNPRHVLSYQEALLNCFTDDRIYKFIHIPVQSGSENVLKA
MNRRHTARDYATLAHAFTERFRKFTLSTDLIVGYPGETAADFNDTLTLLKETRPTVCNIT
RFVTRPGTVAARLETASNQAVSDDIKHERSAILAEAFQQIALENNREWIGDECTVVTEKP
GYRAGTTIARNEAYRPVALQGTFPAGKTLRVRITEAEPFALLAEPLA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcgttttaagccagggctgtgccgcaaatttcggtgacggtgaaaagattgcg
cgcattctctcgcaaaaatccgaagtcacgttcgagtttccggaagcgaagccggcgcat
tccacaaacgccgaaaattccacaagcgccgcgaatcttgaaaatgccgagaattccaca
agcgccgagaatgccgcggacttccgcactgaaaagcccgaagcgttctacctgaacgtt
tgcacggtcaagggcaacgcgggcgccatgaaactcctgcgcaaagcagcgagcacattt
ccgggcgttcccatatatatcacgggttgcgcccccaaggacttccgcgaagaagctctc
cgcaccgttccacacgttcaattcacaagcctgaaagaacttgatgcctcggcaatatta
ccaacccagtccgcgcaatccccctcaagccagataaacgcgcgcactcccgacagcaat
aaagcctctcgcaatgtccttcgcgaatccccgttcgtcggcatcgtgaacatcgaagaa
ggctgtctcgacgcttgcgccttttgcagcacacatctcgtcaaaggccgcctccacagc
tttgcaccccaaaccatcgtggatcaagtccaagcgctcgtcgatgacggttgcctagaa
atccagctcaccggccaagattgcgcctgttacggttttgacatcggcacgaatctcgcc
gaactcacgcaaagaatcctcacgcacgtgaacggcaattaccgcatccgcctcggcatg
ggcaatccgcgccatgtcctcagctatcaagaagcgcttttgaattgcttcacggatgat
cgcatttacaagttcatccacattcccgtccaaagcggcagcgaaaacgtgctcaaggcg
atgaaccgccgccacacagcacgcgactacgcaaccctcgcccacgcctttaccgagcga
ttccgcaaattcacgctcagcaccgaccttatcgtcggctatcccggcgaaaccgccgca
gatttcaacgacacgttaacgctcttgaaagaaactcgaccgaccgtctgcaacatcacg
cgttttgtcacacgcccaggcaccgtcgccgcgcgtctcgaaacagcatccaaccaagcg
gtctccgacgatattaagcacgaacgttccgcgattctcgccgaagcgttccagcaaatc
gctctcgagaacaaccgcgaatggattggcgacgaatgcaccgtcgtcaccgaaaagccc
ggctaccgcgccggaaccacaatcgcccgcaacgaggcctaccgccccgtcgcattacaa
ggcaccttcccagccgggaaaacgctccgcgtccgcatcacagaggcggaacccttcgca
ctgctcgcagaacctctcgcctaa
DBGET
integrated database retrieval system
