Flavobacterium sediminilitoris: LXD69_17615
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Entry
LXD69_17615 CDS
T08185
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fsd
Flavobacterium sediminilitoris
Brite
KEGG Orthology (KO) [BR:
fsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fsd03009
]
LXD69_17615 (rimO)
Enzymes [BR:
fsd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LXD69_17615 (rimO)
Ribosome biogenesis [BR:
fsd03009
]
Prokaryotic type
ribosomal protein modification factors
LXD69_17615 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UOX33838
LinkDB
All DBs
Position
3834570..3835880
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AA seq
436 aa
AA seq
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MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLKANGKEVTHEATKDEGNIIVINTCGFID
NAKEESVNTILEYADKKEQGLVDKVFVTGCLSERYRPDLEKEIPNVDQFFGTTELPLLLK
ALGADYKHELIGERLTTTPKNYAYLKISEGCDRPCSFCAIPLMRGKHVSTPIEKLVIEAE
KLAKNGVKELILIAQDLTYYGLDIYKKRNLAELLENLVKVEGIEWIRLHYAFPTGFPMEV
LDLMKKEPKICNYIDIPLQHISDSVLKSMRRGTTYEKTTNLLKDFRKAVPEMAIRTTLIV
GYPGETEEDFEILKNWVEEMRFERLGCFAYSHEENTHAYSLVDDVPYEVKQERARIIMDI
QAQISWDLNQEKIGQTFKCVIDRKEGEYFVGRTEFDSPDVDNEVLVEASKHYLKTGDFVM
LKITDATEFDLYAEPV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaaatcgttaaagaaaaataaaatcaacgtaattacacttggatgttctaaa
aatgtttatgatagtgaagttttaatgggtcaattgaaagctaatggcaaagaagtgaca
catgaagcaactaaagatgaaggaaacattattgtaattaatacttgtggttttattgat
aatgcaaaagaagaatcggtgaacacgattttagaatatgctgataaaaaagaacaaggt
ttagtagataaagtatttgttacaggatgtttatcggaacgttacagacctgatttagag
aaagaaattcctaatgtagatcaattttttggtactaccgaattaccgttattattaaaa
gctttaggtgctgattacaagcatgaattaataggtgaacgtttaacaactactcctaaa
aactacgcttatttgaaaatttcagaaggttgcgatagaccttgtagtttttgtgctatt
cctttaatgagaggaaaacatgtttctactcctattgaaaaattagtcattgaagccgaa
aaattagctaaaaatggagttaaagaattaatcttaattgctcaagatttaacctattac
ggattagatatctacaaaaaaagaaacttagctgaattattagaaaatttagtaaaagtt
gaaggtattgaatggattcgtttacattatgcttttccaacaggttttccaatggaagta
ttagacttaatgaaaaaagagcctaaaatttgtaattatattgatattcctttacagcac
atttcagatagtgttttaaagtcgatgagaagaggaactacttatgagaaaacaactaat
cttttaaaggattttagaaaagcggttcctgaaatggctatccgtactactttaattgta
ggttatcctggcgaaacagaggaagattttgaaattttaaagaattgggttgaagaaatg
cgttttgaacgtttaggctgttttgcttattcacacgaagaaaatacacatgcttatagt
ttagtagacgatgttccatatgaggtgaaacaagaacgtgctagaattattatggatatt
caagctcaaatttcttgggatttaaatcaagaaaaaattggacaaacttttaaatgtgta
attgacagaaaagaaggagaatattttgtaggaagaaccgaatttgatagtccagatgtt
gataatgaggttttagtagaagcttctaaacattatttaaaaacaggtgattttgttatg
ctaaaaattacggatgcaacagaatttgacttgtatgcagaacctgtttaa
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