Francisella salimarina: KQR59_01790
Help
Entry
KQR59_01790 CDS
T07516
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fsr
Francisella salimarina
Brite
KEGG Orthology (KO) [BR:
fsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fsr03009
]
KQR59_01790 (rimO)
Enzymes [BR:
fsr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KQR59_01790 (rimO)
Ribosome biogenesis [BR:
fsr03009
]
Prokaryotic type
ribosomal protein modification factors
KQR59_01790 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CDKN3
Motif
Other DBs
NCBI-ProteinID:
QWU99637
LinkDB
All DBs
Position
344126..345445
Genome browser
AA seq
439 aa
AA seq
DB search
MIKIPKIGFVSLGCPKNLVDSERIITKLKAEGYDLVDSYDNADMVIVNTCGFLNSAIDES
LEVIGEAIAENGKVLVTGCLGNKADLIKEKHPEVLSITGPQDYENLIEAVHTHAPIFAND
FVSLVPPQGIKLTPRHYSYLKISEGCNNTCTFCIIPDIRGKLKSRSIDNIMREAEKLKNA
GVQELLVISQDTSAYGVDIKYKSGVWNDKEYQSNILDLSIALGELDMWTRLHYVYPYPHV
DKIVPLMAQGKINPYLDVPLQHSSPDVLKRMKRPAHTQKTLDRINKWRDICPDIAIRSTF
IVGFPGETEADFEHLLDFIDKAQLDRVGCFKYSEVEGARANQLDNLISEEVKQQRLDEFM
SLQAQISANKLENFVGTEQKIIIDSINLDENYAIGRTKYDAPEVDGQVIVGDAAERGLKV
GEFATVEITESTEYDLIAD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaattcctaaaattggttttgtgagtcttggctgtccaaaaaaccttgttgat
tctgagcgtataataactaagctaaaagcagagggttatgacttggtagatagttatgat
aatgctgatatggttatagttaatacttgtggatttttaaattctgctatagatgagtct
ctggaagtaattggtgaagcaattgcagagaacggcaaggttcttgttacaggttgtctt
ggtaataaagcagaccttatcaaagaaaaacatcctgaagttctaagtattacagggcct
caagattatgagaacttaatagaagctgtgcatactcatgcacctatatttgctaatgat
tttgtctcactagtacctccacaaggtattaagcttactccaagacattattcgtacttg
aaaatatcagaagggtgtaacaacacttgtacattctgcattattccagacattcgtggt
aagttaaaaagtcgctcgattgataatatcatgcgtgaagcggagaagcttaaaaatgca
ggtgttcaagagttacttgtaatatcacaggatacttctgcttatggtgttgatatcaaa
tataaatcaggagtttggaatgataaagaatatcaaagtaatattttggatctttcaata
gctcttggtgagttagatatgtggacaaggttgcattatgtgtatccataccctcatgtt
gataagatcgtaccattgatggctcagggtaaaataaatccgtatcttgatgtgccgtta
cagcattcatcaccagatgttctcaaaaggatgaaacgacctgctcatactcaaaagaca
cttgatagaattaataaatggcgtgatatttgtccagatatagctattcgaagtactttc
atcgtaggtttcccaggagagaccgaagcagattttgagcatttactagacttcatcgat
aaggcacagcttgatagagttggttgttttaaatactcagaggtagagggtgcaagggcc
aaccaacttgataatttaatctctgaagaggttaaacaacagcgtttagatgaatttatg
agtctgcaagctcaaataagtgctaataagttagaaaactttgttggtacagagcaaaaa
attataatcgattcaataaaccttgatgaaaactatgcaattgggcgtactaagtatgat
gcaccagaagttgatggacaagttatcgttggtgatgcagcggagagaggtctaaaagtt
ggtgagtttgcaactgtcgagattacagaatctactgagtatgatctgatagctgattag
DBGET
integrated database retrieval system
