Fibrobacter succinogenes: Fisuc_2397
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Entry
Fisuc_2397 CDS
T01099
Name
(GenBank) Radical SAM domain protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
fsu
Fibrobacter succinogenes
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fsu03016
]
Fisuc_2397
Enzymes [BR:
fsu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Fisuc_2397
Transfer RNA biogenesis [BR:
fsu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Fisuc_2397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
ACX75983
LinkDB
All DBs
Position
complement(2969099..2970502)
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AA seq
467 aa
AA seq
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MIVVLSQGCAANFGDGEKIARILSQKSEVTFEFPEAKPAHSTNAENSTSAANLENAENST
SAENAADFRTEKPEAFYLNVCTVKGNAGAMKLLRKAASTFPGVPIYITGCAPKDFREEAL
RTVPHVQFTSLKELDASAILPTQSAQSPSSQINARTPDSNKASRNVLRESPFVGIVNIEE
GCLDACAFCSTHLVKGRLHSFAPQTIVDQVQALVDDGCLEIQLTGQDCACYGFDIGTNLA
ELTQRILTHVNGNYRIRLGMGNPRHVLSYQEALLNCFTDDRIYKFIHIPVQSGSENVLKA
MNRRHTARDYATLAHAFTERFRKFTLSTDLIVGYPGETAADFNDTLTLLKETRPTVCNIT
RFVTRPGTVAARLETASNQAVSDDIKHERSAILAEAFQQIALENNREWIGDECTVVTEKP
GYRAGTTIARNEAYRPVALQGTFPAGKTLRVRITEAEPFALLAEPLA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcgttttaagccagggctgtgccgcaaatttcggtgacggtgaaaagattgcg
cgcattctctcgcaaaaatccgaagtcacgttcgagtttccggaagcgaagccggcgcat
tccacaaacgccgaaaattccacaagcgccgcgaatcttgaaaatgccgagaattccaca
agcgccgagaatgccgcggacttccgcactgaaaagcccgaagcgttctacctgaacgtt
tgcacggtcaagggcaacgcgggcgccatgaaactcctgcgcaaagcagcgagcacattt
ccgggcgttcccatatatatcacgggttgcgcccccaaggacttccgcgaagaagctctc
cgcaccgttccacacgttcaattcacaagcctgaaagaacttgatgcctcggcaatatta
ccaacccagtccgcgcaatccccctcaagccagataaacgcgcgcactcccgacagcaat
aaagcctctcgcaatgtccttcgcgaatccccgttcgtcggcatcgtgaacatcgaagaa
ggctgtctcgacgcttgcgccttttgcagcacacatctcgtcaaaggccgcctccacagc
tttgcaccccaaaccatcgtggatcaagtccaagcgctcgtcgatgacggttgcctagaa
atccagctcaccggccaagattgcgcctgttacggttttgacatcggcacgaatctcgcc
gaactcacgcaaagaatcctcacgcacgtgaacggcaattaccgcatccgcctcggcatg
ggcaatccgcgccatgtcctcagctatcaagaagcgcttttgaattgcttcacggatgat
cgcatttacaagttcatccacattcccgtccaaagcggcagcgaaaacgtgctcaaggcg
atgaaccgccgccacacagcacgcgactacgcaaccctcgcccacgcctttaccgagcga
ttccgcaaattcacgctcagcaccgaccttatcgtcggctatcccggcgaaaccgccgca
gatttcaacgacacgttaacgctcttgaaagaaactcgaccgaccgtctgcaacatcacg
cgttttgtcacacgcccaggcaccgtcgccgcgcgtctcgaaacagcatccaaccaagcg
gtctccgacgatattaagcacgaacgttccgcgattctcgccgaagcgttccagcaaatc
gctctcgagaacaaccgcgaatggattggcgacgaatgcaccgtcgtcaccgaaaagccc
ggctaccgcgccggaaccacaatcgcccgcaacgaggcctaccgccccgtcgcattacaa
ggcaccttcccagccgggaaaacgctccgcgtccgcatcacagaggcggaacccttcgca
ctgctcgcagaacctctcgcctaa
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