Fragaria vesca (woodland strawberry): 101292518
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Entry
101292518 CDS
T02666
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03020
RNA polymerase
fve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101292518
09124 Replication and repair
03420 Nucleotide excision repair
101292518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101292518
03019 Messenger RNA biogenesis [BR:
fve03019
]
101292518
03400 DNA repair and recombination proteins [BR:
fve03400
]
101292518
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
101292518
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101292518
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101292518
BRITE hierarchy
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Motif
Pfam:
SHS2_Rpb7-N
S1
Sod_Cu
Vg_Tdu
Motif
Other DBs
NCBI-GeneID:
101292518
NCBI-ProteinID:
XP_004303144
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Position
LG6:15366136..15367547
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AA seq
176 aa
AA seq
DB search
MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR
DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPASV
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccatatagtcttggagaggaacatgcagcttcatcctcgccactttggccgc
aatctccgggaaaatctggtggccaagctcatgaaggatgttgaaggaacttgcagtggc
caacatgggtttgtggttgccataacaggaattgagaacattgggaaagggctaattcgg
gatggtacagggtttgtttcattcccagtcaagtatcagtgtgttgtgttcagaccattt
aaaggagagatcttagaagctgtggttacaatggtgaacaagatgggtttttttgctgag
gctgggccggtacaaatctttgtttccaaccatttgataccggacgacatggagtttcag
tctggtgatatgccaaactatacaacatcagatggatctgttaagattcagaaagatagc
gaagtgcggttgaagataattggaacccgagtagatgccactgaaattttctgcattggt
accatcaaagatgatttcttgggtgtcattaatgatcccgcgagtgtgtag
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