Fragaria vesca (woodland strawberry): 101294852
Help
Entry
101294852 CDS
T02666
Name
(RefSeq) probable DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101294852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101294852
Enzymes [BR:
fve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101294852
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101294852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Ribosomal_L13
Motif
Other DBs
NCBI-GeneID:
101294852
NCBI-ProteinID:
XP_004300118
LinkDB
All DBs
Position
LG5:complement(19431290..19444711)
Genome browser
AA seq
1171 aa
AA seq
DB search
MQQQQHKRRTSAGDLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRI
WFADDPILGRPLKDRSTEPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFP
IMLMSKCCNLRGHDPQQLVYCKEESSEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSF
RDRKEGYTDKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALID
TPDNELYASLTCCYPEKFEKGKGAVGTQLVGERAQIIINEVVDLGLFTRGQCLEHIGEHF
QPLMGGLENEPYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDS
LQNQEVLLPGHLITIYLKEKLEDWLQRTKKLLQDEIKKESNNINFGSVDSLKKVLDKNPT
RQISLAVENMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRT
TSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKMQMSILNV
LIEVGMIPSLPMLVHAGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDD
LEVGYVPLSMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIRCPD
GRDGGRKDAFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALR
NRADQKLYHLKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSV
DRGMFHGLVYQTESIDLSDQKGRSGSQRSFRRSAADKSYHSLIDSDGLPYVGQTIKPDEP
YYSTYDEVKGAIRTTKRKGSEPAIVDYVAIDGKKQLQKVNIRFRHPRNPIIGDKFSSRHG
QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYVDA
TPFANSEKKVKEETNGEKSKTLVDELGEMLKVKGFNYNGAEVLYSGVYGTELTCEIFIGP
VYYQRLRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHD
RLHTCSDYHIADVCSLCGSILTTSSVQPPVRVCEIPGMPPMRAPKKVTCHACKTSKGMET
VAMPYVFRYLAAELAAMNIKLNLQLSNASGA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcagcagcacaagaggaggacgagtgccggagacttggctcacctccgtgag
ctgttccggcaccacatcgagtctttcgattacctcgtctccgccggcctcggcgtcatg
ctccgtgacatcaagcccgtccaagtcgacaatcctctcaccggagaaacccttcgcatc
tggttcgccgatgatcctatcctaggccgacctctcaaggaccggagcaccgagcctctc
tatccttttgaatgtcgccagactcgaatttcatacacagggaaattgttggcagacatt
tatttccagcgtggggataaggctcctgttagagagcagttcaatttcggccagtttccc
atcatgctcatgtcaaagtgttgcaacttaagaggtcatgatcctcagcagcttgtttat
tgcaaagaagagtcatcagaaatgggtggctacttcattttaaatgggctcgagagagtt
attcgacccgttatattgccaaagcggaactatccaatgagtacggtgcgcaattcattt
cgtgatcgaaaggaagggtatacagataaagcagttgtgataagatgtgcaagagatgat
cagtcctcagtaacagtcaaattgtactacctgcaaaacggaagcgcaagacttggtgtt
tggatacagggaaaggagttcttgcttcctgtgggtcttattttaaaggcccttattgac
actcctgataatgaactttatgcgagtttgacatgctgttatcctgagaaatttgagaaa
ggaaagggtgctgttggcactcagcttgtgggtgagagggcgcaaatcattataaatgaa
gtagtggacttgggtcttttcactcgtggtcaatgtctagaacacattggtgagcacttc
caacctctaatgggtggactggagaatgaaccttattcagttgttggagatgccgttctt
aaggactacatatttgttcacctagataagaatgaagacaaattcaatctcctcatattc
atgttgcagaaacttttttcgctgatggatcagacttcagtgcttgacaacccagattcc
ctgcaaaatcaagaagtcttgcttcctgggcacttgattaccatatatctcaaggaaaaa
ctagaggattggttgcaaaggaccaaaaaacttcttcaagatgagattaaaaaggaaagc
aacaatatcaattttggcagcgtcgatagcttaaaaaaggttctggataaaaatcctaca
aggcaaatcagtttagcagttgagaatatgttgaaaactggaagaattaatactcaaaca
ggtctagatttgcagcagagagcaggcttttcagttcaggcagaaaggcttaacttttta
cgttttctatcccattttcgtgctgttcatcgaggggcttcatttgctgggcttcgtacc
acaagtgttcggaaattgcttcccgaatcttggggtttcctttgccctgtgcacacacct
gatggagagccatgtggcttgttgaaccatatgactcgcacttgtagaattacatcgtac
tttgatgcgcaagggaatattagagatttcactaagatgcagatgtctattctcaatgtt
ctgattgaagttggaatgataccttcactgccaatgttagttcatgcgggtcttcctgcc
aatctttcagttcttttagatggtcgtgttgttggttatatatcttccactcaagttgag
aaagttgttgctcatttaaggaagctgaaagtgtcagctgcttcagtgattccagatgac
ttggaagtgggatacgttcctctaagcatgggtggggcatatcctggtctctaccttttc
acttctccttctagatttgttcggccagttaagaatatttcgatctctgctgttgaaggt
caaaacattgaactcattgggccctttgaacaggtgttcatggaaataagatgtcctgat
ggtcgagatggtggaaggaaagatgctttccctgcaactcatgaagaaattcatccaact
gggatgctcagtgttgttgctaatcttactccctggtcagaacataatcagagtccacga
aatatgtaccagtgtcagatggcaaaacaaacaatgggtttctcattacaagcacttcgc
aatcgtgcagatcagaagttgtatcatctgaagactcctcaatctcccattgtccgcaca
aaaacatatacaaattactgtgtagatgaatatccaacgggcacaaatgcaatcgttgct
gtactgtcatatactgggtacgatatggaggatgctatgattctaagcaagtcatctgta
gatcgcggaatgtttcacggattagtgtatcagacggaatccattgacttgtctgatcaa
aagggtaggtcaggatcccagagatcgttcaggagaagtgctgctgacaagtcatatcat
tctctaatcgattcagatggtcttccttatgtgggtcagacaataaaaccagatgaaccc
tattatagcacttatgatgaggtaaaaggtgccataagaacgacaaaacgaaaagggtca
gagcctgctattgttgactatgttgctattgatgggaagaaacagcttcagaaggtgaac
atacggtttcgtcaccctagaaaccctataattggtgataaatttagcagccgacatgga
caaaaaggagtttgctcccagttgtggcctgacattgatatgccattttctggagttacg
ggaatgcgcccagatcttatcatcaatccacatgcatttccatcaagaatgacgatagcc
atgcttttggagtcggttgctgcaaagggtggtagcttacatggaaaatatgttgatgca
acaccatttgctaattcagagaagaaagttaaggaagaaactaatggagagaaatccaaa
acccttgttgatgaacttggtgaaatgttaaaggttaaagggtttaactacaatggtgca
gaggtattgtacagtggcgtctatggaacagaactcacgtgtgaaatcttcattggtcct
gtttattatcaacgattacggcatatggtttcagacaaatttcaggttcgttctacggga
atggtagatcaagtcacacggcagcctataaaaggacgaaaacgaggtggtggtatacgt
tttggtgaaatggagagagactccttgcttgcacatggggcagcatatttgttgcacgat
agacttcatacatgttctgattatcacattgctgatgtatgttccctctgtggatccatc
ctaacaacctcatcagtccagccaccagtacgggtttgtgaaatccctggcatgcccccc
atgagagctcccaagaaggtgacttgccatgcatgtaagacgagtaaagggatggagacg
gttgcaatgccttatgtgtttagatacttagctgctgagttagcagctatgaacataaaa
ctgaacctccagttgagcaatgcaagcggagcttga
DBGET
integrated database retrieval system
