Fragaria vesca (woodland strawberry): 101295197
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Entry
101295197 CDS
T02666
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101295197
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101295197
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Gp5_C
Motif
Other DBs
NCBI-GeneID:
101295197
NCBI-ProteinID:
XP_004292143
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Position
LG2:4387974..4389582
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AA seq
498 aa
AA seq
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MDQKLMNVLTISFLLVLAFTPVHSSVFFDVTSAKYGGKPNTDITKALLNAWTDACASPWE
STIYVPKGTYGLKGAIFVGHCKAPIELQVEGTLQAPEETGQVTSPDTWVGFRYLNRLTLS
GGGTFDGRGALSWKQNDCNTNKNCKSRVVNIRFDFVNDTIIKDITSLDSKNFHFNVFACN
NITFQHATITAPGDSVNTDGIHIARSTMVTVANTSIGTGDDCISLGDGTSQLKFTNVTCG
PGHGISIGSLGGHRDEQPVTGVIIKNVTFNSTQNGARIKTWPGSYGGLVSDIHYEDIIMV
NVSNPIIIDQEYCPWNLCNKKIPSKVKISNVSFKNIKGTSTTPLAVNFICSWSVPCENVE
ISGIDLTYTGHKGFISSQCSNVKLATIANVTKALACGNYSPASKNHTEAHSPEISRSENQ
TVSKNQTETVAGNRNEPARVDQRKYRRLLMTSSGPESDDRFLRVTSSAPNNRSTCGWLQP
RAIVQLLRGFWLPLHGWF
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaaattgatgaacgtcttgacaatatctttcttgttagtgttggcgtttaca
ccagttcattcctctgtcttcttcgacgtgactagtgcaaaatatggtggaaaaccaaac
acagacattacaaaggctttgctgaatgcttggactgatgcatgcgcatcgccgtgggag
agtacaatttatgttccaaaaggcacctacggattaaaaggagcaattttcgtaggtcat
tgcaaggctcctattgagcttcaggttgaaggcacattgcaggctccagaagaaaccggc
caagtcacatcaccggatacttgggttggttttcggtaccttaataggctcactttgtca
ggtggtggaacttttgatggccgcggagcactctcttggaaacaaaacgactgtaacaca
aacaaaaactgcaaatctcgggttgtgaatataaggttcgacttcgtcaacgatacaata
atcaaggacataacttcacttgacagcaagaactttcacttcaacgttttcgcctgcaac
aatattacattccaacatgcaaccatcacagcacctggagacagtgtcaacacagacggt
atccacattgcacgatcaacaatggtcaccgtcgccaacacaagcatcggaaccggagac
gattgtatctcgctcggtgatgggacttcacaactcaaatttaccaatgtaacttgcgga
ccaggccacggcataagcattggcagcctcggagggcaccgcgatgaacaaccggtaact
ggtgtcataatcaagaatgtaacattcaacagcacgcagaatggtgcaaggatcaagacg
tggccgggctcttatggtggtcttgtgtcagatatacactatgaggatattatcatggtg
aatgtcagcaacccgatcattatagaccaagagtactgcccatggaacttgtgcaacaag
aagattccttccaaagttaagatcagcaacgtgagcttcaagaacattaagggcacgtcc
acaactccgcttgccgtaaactttatttgtagctggagcgtgccgtgcgagaatgtggag
atttccggcattgatctcacgtacaccggacacaaaggatttatcagttcacaatgctcc
aatgtcaaactggcgaccattgctaacgtgacaaaagctcttgcttgtggtaactattcg
ccggcatcaaagaaccacaccgaggctcattctccagaaattagccgatccgagaaccag
accgtgtcgaaaaaccagactgaaactgttgcaggaaatcggaatgagccggccagagtt
gatcaacgtaagtatcgtcgtctgcttatgacgtcctcgggaccagaaagtgatgatcgc
tttttaagagtcacgtcctccgctccaaataatcgcagtacttgtgggtggctacaaccg
agggcaatagtgcagctcctaaggggtttctggcttcccctacatgggtggttttag
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