KEGG   Fragaria vesca (woodland strawberry): 101297619
Entry
101297619         CDS       T02666                                 
Name
(RefSeq) nuclear-pore anchor
  KO
K09291  nucleoprotein TPR
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101297619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101297619
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101297619
SSDB
Motif
Pfam: TPR_MLP1_2
Other DBs
NCBI-GeneID: 101297619
NCBI-ProteinID: XP_004293787
LinkDB
Position
LG3:complement(6555094..6575262)
AA seq 2101 aa
MPLFVSDEEFSGHRGDAAWVAEKADAFIRNLCTELDTVKAQNDAASITAEQTCSLLEQKY
LSLSDEYTKLESELAQLKSSFDERLTELSEVQSQKYQLNLQAINKDSEIEMLKTEVSELH
KSKRQLIEIVEQKDEDISAKNVTIQSYLEKIVKSAENAAQREARLSEAEAELARTKDSCT
HLSQEKELIERHNVWLNDELAAKVDSLIKLRRANADIEAEMSFKLSDVERKFNDCSSSLN
WNKERVRELEAKVTSLQEELRSSKDNAIANEERSNAELSTMNKLVELYKESSEEWSKKAG
ELEGVIKALETHLSQVENDYKERLEREVSARSQFEKEAADLKTKLEKCEAEIETSRKANE
LSLLPLNSSGREMWLNSLEPADMAEVNGAVVPKIPVGVSGTALAASLLRDGWSLAKMYVK
YQEAVDAMRHEQLGRKESEAILQRVLYEIEEKAEVIMEERAEHERMAEAYSMINQKLQDS
VSEQEYLQRLITELKADIRRHERDYSFAQKEIADLQREVTVLLKECRDIQIRGASSGHDY
DNALVVHSESDTEKVISEHLLTFKDINGLVQQNAQLRSLVRNLSDQLENREKEFKEKLEM
ELKKHSDEAASRVEAVLQRAEEQGQMIESLHTSVAMYKRLYEEEHKLHSSSPHLIEAAPE
ERRSDVRHLLESSQEASRKAQDHAAERVKCLEQDLAKARCEIISLRSERDKFASEANIAR
EKLESFMKEFELQRNETNGVLARNIEFSQLIVDYQRKLREGSESVQTAEELARKLTMEVS
LLKQEKEMLQHAEKRASDEVRSLSERVYRLQASLDTIQSTQQVREEARAAERRKQEEYTE
QKEREWADAKRELQEEKNNALTLALDRDQTIKNAIKQVEEMRKDLSNALHAAASAESRAA
VAEARLSDLEKKSSSSDIQVVGIDGASGSSSLTGNEAMVALRAAKDEIKNLKDEMQANKD
HMLQYKSIAQVNEDALKQMEFAHDNFKLEAEKLMKSLDAELLSLRERVSELENELTLKSQ
EVASAAAGKEEALSSALAEISSLKEETLAKTSQTAALEIQVSALKEDLEKEHQRWRTAQA
NYERQVILQSETIQELTKTSQALAVLQQEASELRKLNDAIKSENDELKSKWEVDKAMLEE
SASIAEKKYNEINEQNKVLHSQLEAVHIQLAERDRGSFGTSTGADTSGDAGLQTVISYLR
RTKEIAETEISLLKQEKLRLQSQLESALKASETAQASLRAERASSRSMLFSEEELKSLQL
QVREINLLRESNIQLREENKHNFEECQKLHEISQKASVERHNLERLLRDRQIEVEACKKD
IEMQKMEKDHLEKRLNELLERYRNIDVEDYDRTKAEHQQMQVTLKEKDSHIEEVKKLLSE
KLEIVSSLEKDLANVRSELTERDRRINDMLQAEASLKSDVERQRRIGLQFKRKYETCLRE
KEDLQRQKEDLQKQKDDLHRQCDDLQKQRDDLVRQLEEKQAKRFSSDPAGEHALKEEKDQ
KIQTLQKMMERQKEAMKEAMERQKEDLLRNEKANRRKTENAVLESLNKIEQDKVMFKNEL
EKHKLAVRQLSDEQEKLKHAKDGLPEGTSVVQHLSGATLDDRASAYFLACENYERVAHST
LNELGAGGAPADTPVADALLAATSAPAQAATHASPVTTTAVLPSKATDETERRFTFPKRN
IEPRKPGRKLVRPRGLVRSEEPQGDVEMSETEGTQTSNKHAASTDTEVQGVATSAQPLFR
KRQASSSQFESQEDSMNQGDTGPDAAAPVSKKPKGSDSPPRSEGLAPAPLENLANVPATE
EALNADFPQGSNEEGAVDAEKEEVENTVMKVEEPIEQQFDGSSQPESQLDNSIIMEENVD
GSDIKEMVPEEGAKDNQMEPDNRQSFEVEGDREEGELLPDVSDLEGGGDTTIGSPGIEEG
QPEPVTTPRASPSRVDDEDLAGASLDISEVNSPEILNEENNNEVDVPEETAEASDKSNDG
IDPTAVETDLAAEAASITGEASITGESTSASTTTEVGGSKQASTSASTEVEEPKQVSPST
TTINIIEQARRNAELRQRGQLGRTVTPPTPNRGRGRPPQRARARAVRRPVRGRGSTSGDQ
V
NT seq 6306 nt   +upstreamnt  +downstreamnt
atgcctctcttcgtctccgacgaggagttctccggccaccgcggcgacgccgcttgggtg
gcggagaaggccgacgcgttcatccggaacctctgcaccgagctcgacaccgtcaaggcg
caaaacgacgccgcttcgatcaccgccgagcagacctgctctctcctcgagcagaagtac
ctctccctctccgatgaatacaccaagctcgagtccgaactcgcgcagctcaagtcctcg
ttcgacgagcgcctcaccgagctctccgaagtgcagtcgcagaagtaccagctcaattta
caagcgattaataaagatagtgagatagagatgttgaagactgaggtttcggagctgcat
aaatcaaagaggcagttgatcgagatagtggagcaaaaagatgaggatattagtgcaaag
aatgtcaccatccagtcttatctcgagaagattgtcaagtcagctgagaatgctgcccag
agggaggcccgattgagtgaagctgaggcggagttagcacgcaccaaggattcatgtact
catctttcacaggagaaagaacttatcgagaggcataatgtctggcttaatgatgagtta
gcagctaaagttgacagtctcatcaagcttcgtagagcgaatgctgatattgaggcagag
atgtcttttaagctttcagatgttgaacggaaattcaatgactgttctagctccttaaat
tggaacaaggaaagagtgagggaactagaagcaaaggtgacgtcgttgcaggaggaactg
cgctcatcgaaagataatgccatagctaatgaagagagatctaatgccgaactctcgacg
atgaataagcttgttgaactatataaggaaagttcagaggaatggtctaaaaaggcggga
gagcttgagggtgtgatcaaagctctggagacacatttgagtcaagttgaaaatgattac
aaggagagacttgaaagggaagtgtcggcaagaagtcaatttgaaaaggaggctgcagat
ctgaagacaaaacttgagaaatgcgaagcagaaattgaaactagcaggaaagctaatgag
ctgagtcttctcccacttaatagttctggcagggagatgtggttgaattcattagaacct
gctgacatggctgaggttaatggtgcggttgtgccaaagattcctgttggtgtttctgga
acagcattagcagcttcgcttctgcgcgatgggtggagtcttgcaaaaatgtatgtgaag
taccaagaggcagtggatgccatgcgtcatgagcagttgggaaggaaggaatctgaggca
atcttgcaacgggttttatacgaaatagaagagaaagcagaagtgattatggaagaaaga
gcggaacatgaaagaatggctgaggcatattctatgatcaaccagaagttgcaggactcg
gtttctgaacaagaatacttgcagagactgataactgagttgaaggctgacataaggagg
catgaacgtgactactcctttgctcaaaaagagattgctgatcttcagagagaggtgaca
gtccttttgaaagaatgtcgagatatacagattcgtggtgcatcttcgggtcatgattat
gacaatgctcttgtggtgcactcggaatctgatactgagaaagtcatatctgaacatctt
ttgaccttcaaggacataaatggtctggttcagcagaatgctcagcttaggagtcttgtt
cgcaacctttctgaccagcttgaaaatagggaaaaggagtttaaggaaaagttagaaatg
gagcttaagaagcatagcgatgaagctgcttctagagtggaggctgtgttacaaagagct
gaagagcaagggcaaatgattgaatcccttcacacctctgtcgcaatgtacaaaaggttg
tatgaagaggagcataaacttcattcgtctagtccccatttaatagaggctgctccagag
gaaagacgaagtgatgttaggcatctacttgagagttctcaggaagctagcagaaaggcc
caagatcatgctgcagaacgagtgaaatgtctggagcaagatctagcgaaggccaggtgt
gagataatatcattgcggtcagagcgtgacaaatttgcttcagaagcgaatattgctaga
gaaaaacttgagagctttatgaaagaatttgagcttcagaggaacgaaacaaatggtgta
ttagcaaggaacattgagttctcgcaactaatagttgactaccagcgaaagctgcgtgaa
ggttctgagtctgtgcaaactgctgaggagcttgctaggaagttgactatggaggtatct
cttttgaagcaagaaaaggaaatgctgcaacatgctgagaagagagcttcggatgaagtt
cgtagtttgtcagagagggtttatagactgcaggctagtttggacactattcagagcaca
cagcaagttcgcgaggaggcaagagcagctgagaggagaaaacaagaagagtatacagaa
caaaaagagagggagtgggctgatgctaaaagagaattgcaagaagagaaaaataatgcc
ctcactcttgcacttgaccgcgatcaaaccataaaaaatgccatcaagcaggttgaagaa
atgagaaaagatttgtctaatgcacttcatgctgctgcatctgctgagagtagagctgct
gtagctgaggccagactgtctgacctggagaaaaagagttcatcctcagatatccaggtt
gttgggattgatggtgcgagtggatcctcttctttgacaggcaatgaggctatggtggca
ttgcgtgctgcaaaggatgagatcaagaatttgaaagatgaaatgcaggctaataaagat
cacatgttacagtataagagtatagctcaggtaaacgaggatgcgttgaaacagatggaa
tttgcacatgataacttcaagcttgaggctgaaaaactgatgaagtctctagatgccgaa
ctactctctttgagagagagggtctctgaacttgaaaatgagcttacattgaagtctcaa
gaagtggcttctgctgccgcagggaaggaagaagctctctcctctgctttagcagaaatt
tcaagcctaaaggaagaaaccttagcaaaaacttctcaaactgccgccctggagattcag
gtttctgctttgaaggaagacttggagaaagaacatcagcgatggcgcactgcacaggct
aattatgaaagacaggtcattctccagtcggagacaatacaggagttgactaaaacatca
caagctttggctgtgctccagcaggaagcatcagagttgcgtaaattgaatgatgcaatc
aaaagtgaaaatgatgaactgaagtccaagtgggaagttgataaggcaatgttagaggaa
tccgctagtattgctgagaagaagtacaacgaaatcaatgaacagaataaagtactgcac
agtcagctggaggctgtgcacattcaattggccgagagagatcgtggttcatttggaaca
agcactggagcagatacttccggtgatgctggtttacaaactgtgataagctatcttcga
cgtacaaaagagatcgcagagacagagatatccttattgaaacaagaaaaactacgattg
caatcacaacttgagagtgccctcaaggcttcagaaacagcccaagcatcacttcgtgcc
gagcgtgcaagttcaaggtcaatgttgttctcagaggaggaactaaaatccttacaacta
caggttagggaaataaacttgctccgggaaagtaatatccaactcagagaagaaaataaa
cacaattttgaggaatgccagaaattgcatgaaatatcacaaaaggctagtgttgagcgt
cacaacctagagaggctgttaagggatagacagattgaggtggaggcatgtaaaaaagac
attgaaatgcaaaagatggagaaagatcacttggaaaagaggcttaatgagttacttgaa
aggtatagaaacatagatgttgaagattatgatcgcaccaaggctgaacatcagcagatg
caggtaacattgaaggagaaggattcccatatagaagaagtcaagaaacttctttcagag
aagctggagattgtttcgtctttagaaaaagatcttgcaaacgtcagatcggaactgact
gagagggataggaggataaatgacatgttgcaagcagaggcaagtttaaaatcagatgtg
gagaggcaaaggaggattggccttcagtttaagaggaagtatgagacatgcttaagggaa
aaggaggatcttcaacgacaaaaggaggatcttcaaaagcaaaaggatgaccttcacagg
caatgcgacgaccttcaaaagcagagggatgaccttgttaggcagttggaagaaaaacaa
gcaaaacgattttcaagtgatcctgcaggggagcatgccctaaaagaagagaaagaccaa
aaaattcagactctgcaaaagatgatggagaggcagaaagaggcaatgaaagaggcaatg
gagaggcagaaagaggacctcctacgtaatgagaaagcaaaccgcaggaagactgagaat
gctgttttggaatctcttaataaaattgagcaggataaagtaatgttcaagaatgagctg
gagaagcataagctggctgtcaggcagctttcagatgaacaggaaaagctgaagcatgca
aaagatggtcttcctgagggtacctcagttgttcaacatctttctggagccacactggat
gatcgagcttctgcttacttcttggcctgtgaaaattatgaaagggtagcacattcaact
ttgaatgagcttggagctggtggtgcccccgcagacactccagttgcagatgctttgtta
gctgctacttctgctcctgctcaagcagccacccatgcatccccagtgactactactgca
gttttgccatccaaagcaacagatgaaactgagaggaggttcacttttcccaaaagaaac
attgaacctcgtaaaccaggaaggaaattggttaggccccgtggtcttgtaagatctgaa
gaaccccaaggtgatgtagagatgtcagagacggaagggacccagacttcgaacaaacat
gcagcatccactgacactgaagttcagggtgttgctacttcggcacaaccactgtttcga
aaacgtcaagcttcttcttctcagtttgaatctcaagaggactcaatgaaccaaggggat
actggtcctgatgcggcagcacccgtctcaaaaaagcccaaaggttcagattctccacca
aggagtgaagggctagcacccgctccattggaaaatcttgccaatgttccagccacagaa
gaagctttaaatgctgattttcctcaaggttcaaacgaggaaggtgctgttgatgctgag
aaggaagaggttgagaatactgtgatgaaggttgaagagccgattgaacaacaatttgat
ggttcaagtcaacctgaatcacaacttgacaatagtatcattatggaagaaaatgtggat
ggatcagacattaaagagatggtgcccgaagagggagcaaaggacaatcagatggagccc
gacaaccgtcagtcctttgaagttgaaggtgacagagaagagggagagcttctgcctgat
gtatcagaccttgaaggtggtggtgatacaacgatcggcagtcctggtatagaggaaggt
caacctgagcctgttacgacacccagagcttcaccttctagggtcgatgatgaagatctt
gctggtgcttcattggatattagtgaggtgaattctccagagattctgaatgaagagaat
aataatgaagttgatgtacctgaagagacagctgaagcctctgataagtcaaatgatggc
atcgatccaactgcagtagagaccgacctcgctgctgaagctgcctctataactggtgag
gcctctataactggtgagagtacctctgcaagtacaaccacagaggttggtggttcaaaa
caagccagtactagtgccagcaccgaagtagaagagccaaagcaggtttctccttccacg
accaccataaatataattgaacaagctaggcggaatgctgagttgagacagcgtggacag
cttggacgaactgtcacacctccaaccccaaatcgaggtcgtggaaggccaccacaacgc
gcccgtgcgcgtgctgtgcggcgccctgtgcgtggacgtggatccacatctggcgatcaa
gtttga

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