Fragaria vesca (woodland strawberry): 101299706
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Entry
101299706 CDS
T02666
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101299706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101299706
Enzymes [BR:
fve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101299706
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101299706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Ribosomal_L13
Motif
Other DBs
NCBI-GeneID:
101299706
NCBI-ProteinID:
XP_004307166
LinkDB
All DBs
Position
LG7:11649492..11663224
Genome browser
AA seq
1169 aa
AA seq
DB search
MQQHKRRTSAGDLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWF
ADDPILGRPLKDRSSEPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIM
LMSKCCNLRGHDPQQLVSCKEEASEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRD
RKEGYTDKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALVDTP
DNELYASLTCCYPGKFEKGKGAVGTQLVGERAQIIINEVVELGLFTRGQCLENIGEHFQP
LMSGLENESYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQ
NQEVLLPGHLITIYLKEKLEDWLQRTKKLLQDEIKKENNNINFGSVDSLKKVLDKNPTRQ
ISLAVENMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTS
VRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKIRMSILNVLI
EVGMIPSLPMLVHVGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLE
VGYVPLSMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIKCPDGR
DGGRKDAFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNR
ADQKLYHLKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDR
GMFHGLVYQTESVDLSDQKGRSGSQRSFRRSAADKSHHSLIDSDGLPYVGQTINPDEPYY
SIYDEVKGAIRTTKRKGSEPAIVDYVAIDGKKHLQKVNIRFRHPRNPIIGDKFSSRHGQK
GVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATP
FANSEKKVNEETNGEKSKTLVDELGEMLKVKGFNYYGAEVLYSGVYGTELTCEIFIGPVY
YQRLRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRL
HTCSDYHIADVCSLCGSILTTSSVQPQVPVREIPGMPPMRAPKKVTCHACKTSKGMETVA
MPYVFRYLAAELAAMNIKLNLQLSNATGA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcataagaggagaaccagtgccggagacttggctcacctgcgtgagctgttc
cggcaccacatcgactctttcgattacctcatcaccgccggcctcggcgtcatgctccgt
gacatcaagcccgtccaagtagacaatcctctcacaggagaaacccttcgcatctggttc
gccgatgatcctatcctaggccgtcctcttaaggaccggagcagcgagcctctctatcct
tttgaatgtcgacagactcgaatttcatacacagggaaattgttggcagacatttatttt
cagcgtggggataaggctcctgttagagagcagttcaatttcggccagtttcccatcatg
ctcatgtcaaagtgttgcaatttaagaggtcatgatcctcagcagctagtttcttgcaaa
gaagaggcatcagaaatgggtggctacttcattttaaatgggctcgagagagttattcga
cctgttatattgccaaagcgaaactatccaatgagtacagtgcgcaattcatttcgtgat
agaaaggaaggatatacagataaagcagttgtgataagatgtgcaagagatgatcagtcc
tcagtaactgtcaaattgtactacctgcaaaacggaagcgcaagacttggtgtttggata
caggggaaggagttcttgcttcctgtgggtcttattttaaaggctcttgttgacactcct
gataatgaactttatgcgagtttgacatgctgttatcctgggaaatttgagaaaggaaag
ggtgctgttggcactcagcttgtgggtgagagggcgcaaatcattataaatgaagtagtg
gagttgggtcttttcactcgtggtcaatgtctagaaaacattggggagcacttccaacct
ctaatgagtggcctggagaatgaatcttattcagttgttggagatgccgttcttaaagac
tacatatttgttcacctagataagaatgaagacaaatttaatctcctcatattcatgttg
cagaaacttttttcgctgatggatcagacttcggtgcttgacaacccagattccctgcaa
aatcaagaagtcttgcttcctgggcacttgattaccatatatctcaaggaaaaactagag
gattggttgcaaaggaccaaaaaacttcttcaagatgagataaaaaaggaaaacaacaat
atcaattttggcagtgtcgatagcttaaaaaaggttctggataaaaatccgactaggcaa
atcagtttagcggttgagaatatgttgaaaactggaagaataaatactcaaacaggtcta
gatttgcagcagagagcaggcttttcagttcaggcagaaaggcttaactttttacgtttt
ctatcccattttcgtgctgttcatcgaggggcttcatttgctgggcttcgtaccacaagt
gttcggaaattgcttcccgaatcttggggcttcctttgccctgtgcacacacctgatgga
gagccatgtggcttgttgaaccatatgactcgcacttgtagaattacatcgtactttgat
gcgcaagggaatattagagatttcactaagattcggatgtctattcttaatgttctgatt
gaagttggaatgattccttcactgccaatgttggttcatgtgggtcttcctgccaatctc
tctgttcttttagatggtcgtgttgttggttatatatcttccactcaagttgagaaagtt
gttgctcatttaaggaagctgaaagtgtcggctgcttcagtgattccagatgacttggaa
gtgggatacgttcctctcagcatgggtggggcatatcctggtctctaccttttcacttct
ccttctagatttgttcggccagttaagaatatttcgatttctgctgttgaaggtcaaaac
attgaactcatcgggccctttgaacaggtgttcatggaaataaaatgtcctgatggtcga
gatggtggaaggaaagatgctttccctgcaactcatgaagaaattcatccaactgggatg
ctcagtgttgttgctaatcttactccctggtcagaacataatcagagtccacggaatatg
taccagtgtcagatggcaaaacaaacaatgggtttctcattacaagcacttcgcaatcgt
gcagatcagaagttgtatcatctgaagactcctcaatctcccatcgtccgcacaaaaaca
tatacaaattactgtgtagatgaatatccaacgggtacaaatgcaatagttgctgtactg
tcatatactgggtacgatatggaggatgctatgattctaagcaagtcatccgtagatcgc
ggaatgtttcacggactagtgtatcagacggaatccgttgacttgtctgatcaaaagggt
aggtcaggatcccagagatcgttcaggagaagtgccgccgataagtcacatcattctcta
atcgattcggatggtcttccttatgtgggtcagacaataaacccagatgaaccctattat
agcatttatgatgaggtaaaaggtgccataagaacgaccaaacgaaaagggtcagagcct
gctattgttgactatgttgctattgatgggaagaagcatcttcagaaggtgaacatacgg
tttcggcaccctagaaaccctataattggtgataaatttagcagccgacatggacaaaaa
ggagtttgctcccagttgtggcctgacattgatatgccattttctggagttacgggaatg
cgcccagatctcattatcaatccacatgcatttccttcaagaatgacgatagccatgctt
ctggagtcggttgctgcaaagggtggtagcttacatggaaaatttgttgatgcgacacca
tttgctaattcagagaagaaagttaatgaagaaactaatggagagaaatccaaaaccctt
gttgatgaacttggtgaaatgttaaaggttaaagggtttaactactatggtgctgaggta
ttatacagtggcgtctatggaacagaactcacgtgtgagatcttcattggtcctgtttat
tatcaacgattacggcatatggtttcagacaaatttcaggttcgttctacaggaatggta
gatcaagtcacacggcagcctataaaaggacgaaaacgaggtggtggtatacgttttggt
gaaatggaaagagactccttgcttgcacatggggcagcatatttgctgcacgatagactt
catacatgttctgattatcacattgctgatgtatgttccctttgtggatccatcctaaca
acctcatcagtccagccacaagtaccagttcgtgaaatcccgggcatgccccccatgaga
gctcccaagaaggtgacttgccatgcatgtaagacaagtaaagggatggagacggttgca
atgccttacgtgtttagatacttagctgctgagttagcagctatgaacataaaactgaac
ctccagttgagcaatgcaactggagcttga
DBGET
integrated database retrieval system
