Fragaria vesca (woodland strawberry): 101304714
Help
Entry
101304714 CDS
T02666
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101304714
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101304714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
101304714
NCBI-ProteinID:
XP_004289110
LinkDB
All DBs
Position
LG1:8978160..8980898
Genome browser
AA seq
352 aa
AA seq
DB search
MSLSFFIQFACLVSSLLVSVTLVHAQTRVFDVTNYGGRGDGITDNSKAFIDAWDGACQNI
GGGMVLFPQGIFMVAPVVLLGPCKGSMELRIQGTLLASRKLSDFLGIDHWITIQYVNGLL
ISGGGTLDGVGADGWPYNDCLQHPGSCKRLPADVLVSNVNILAPGNSPNTDGIHIGSSQN
IYIVHTNISTGDDCVSISSGSQYINVTGVQCGPGHGISIGSLGKDAGDTVNDLYVTHCRF
VGTQNGVRIKTWADAKPGTVSRVSFEHLEIVNVGNPIIIDQEYCPGGGCSTQVSSKVQIG
DVKFNDIRGSSATNEAVVLKCSQSVPCQDIELTDIDLIKERRTWRTGGFIVL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaagctttttcatccaatttgcttgcttagtgtcgtccttgcttgtatccgtt
accctagttcatgctcagacaagggttttcgatgtgacaaactatggtggtcgtggagac
ggaataacagataacagcaaggccttcattgatgcatgggacggagcttgtcaaaacata
ggaggaggtatggtgctgttcccacaaggcatcttcatggtggctccggtggttcttcta
ggtccatgtaagggatcaatggaattgcgaattcagggtaccctactggcttctaggaag
ctcagtgatttccttggtattgaccattggatcaccatacaatacgttaacgggttgctg
attagtggtggaggaaccctagatggcgtcggagccgatggttggccctataatgattgc
ctccaacatccaggcagttgcaagcgactccctgctgacgtgcttgttagcaacgtcaac
atattagctccgggaaacagtcccaacaccgatggaatccacattggcagctcacagaac
atctatatcgtgcatacaaacatatcgaccggagacgattgcgtctccatctcctccgga
tcacaatacataaacgtcaccggtgtccaatgcggtccaggccatggaataagcatcgga
agcctcggcaaagatgccggtgacactgttaacgacttgtatgtaacacactgcagattc
gtgggtactcagaatggtgtgagaatcaaaacatgggcagatgctaaaccgggaactgtt
tcgcgtgttagctttgagcaccttgaaatagttaatgtgggcaatcccatcattattgat
caagaatattgccctggtggtggttgtagtacacaggtgtcctccaaagtccagattggg
gatgttaagttcaatgacattagaggcagttctgccacaaacgaggcagttgtcctgaaa
tgcagccaaagtgtaccttgtcaagatatcgagctgacggacatcgacctaattaaagaa
cggaggacctggaggaccggcggtttcattgtcctataa
DBGET
integrated database retrieval system
