Fragaria vesca (woodland strawberry): 105350804
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Entry
105350804 CDS
T02666
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105350804
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105350804
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
HJURP_C
Motif
Other DBs
NCBI-GeneID:
105350804
NCBI-ProteinID:
XP_011462050
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Position
LG3
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AA seq
516 aa
AA seq
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MTIEQDLGWLPSEMVVVGKPWQHVEITDGCTSFGLAAFGGVVVEALAKEGVQFAEAGGRP
DRLSPAKKTAERKQDQDARVWVLAWTIGPRIGLTLKLNQGWDWADGPPRMLGLISGFRVY
LFLFLLVWATEGQNVNLFHQTEQLGGRKFFNVMDYGAVEGGVTDNSQAFLKAWNDACQWR
GMARVLIPRGIFMLFPVVFSGPCKGRIAFLILGTLRASTEPSTFNSENWINFRYLEQLTV
AGGGTLDGQGPLVWPRNNCNNHPCRTLPISLSFDFVNNATVAYLRSYNSKNAHIRLFGCN
KMDFTKLRLSAPGDSPNTDGIKIGSSYRIRISRSVITTGDDCIAILSGSREIHIHKIFCG
PGHGISIGSLGGYGNEHDVEGVYVKDSGSKGTTNGLRIKTWADSHPLKVSKIIYENIVMT
DVMNPIIIGQNYCPSPPCNQQVTSNVQISNVTYNNIRGSSSSKEAVILKCSKTSPCKNIV
MNNIKLSLDGPGGIASSYCENAVGVTYGTQNPRPCI
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgaacaagatctgggttggctaccgtcagagatggtagtcgttggaaaacct
tggcagcacgtcgaaatcacggatggttgtacgagttttgggttggctgcttttggtggc
gtcgtcgtggaagccttggccaaggaaggtgtgcagtttgcagaagcaggtggcaggcct
gataggttgtcgccggcaaagaagactgctgaaaggaagcaagaccaagatgctagggtt
tgggtgttggcttggacaattgggcctcgaattgggctcacactcaagctaaaccaaggt
tgggattgggctgatggtccacctagaatgttgggtttaattagtgggtttagggtttac
ttgttcttgttcttgttggtatgggcaacagaaggccagaatgttaacctctttcatcaa
accgaacaacttggcgggcgcaagtttttcaatgtgatggattatggagctgttgaaggt
ggagtaactgataacagccaggcattcttgaaagcatggaatgatgcatgtcaatggaga
ggaatggcaagggttttgattcccagaggaatattcatgttgttcccagttgtattctca
ggtccatgcaagggtcggatcgcctttttgattctggggactttaagagcctctacagaa
ccatcaacattcaactctgagaattggataaacttccgatacttggagcagttaaccgta
gccggaggcggtaccttggacggccaaggacccttagtttggcctcgtaacaactgcaac
aatcatccatgcaggacactccccatctcattgagttttgacttcgtcaataatgcaacc
gtcgcatacttgagatcatacaacagcaaaaatgctcatatcaggctttttggatgcaac
aaaatggacttcaccaaacttagattgtcagctccaggtgatagcccaaacaccgatggc
ataaaaatcggaagctcctaccgcatcagaatctcacgttcggttatcaccaccggcgat
gactgcattgccatattgtcaggaagtagggaaatccacattcataagattttctgcggt
cctgggcatggaatcagcattggaagtctcggagggtatggtaatgaacatgatgttgaa
ggagtatatgtgaaagatagtggttcaaaggggactaccaatggtctaagaatcaaaaca
tgggctgattctcatcccttgaaggtttcaaagattatatatgaaaacattgtgatgact
gatgtcatgaatccaattattatcggtcagaattattgccccagccctccctgcaatcaa
caggttacttcgaatgtgcagattagtaatgtgacatataataacatacggggaagttct
tcttccaaagaagcagtgattctgaaatgcagcaaaaccagcccttgcaagaacatagtg
atgaacaatatcaagttatccctcgacggtcctggaggtattgcgagttcttactgtgaa
aatgccgttggcgtcacttatggcacacaaaacccccgtccttgcatatga
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