Frieseomelitta varia: 122530551 Help Entry 122530551         CDS       T09482                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism fvi  Frieseomelitta varia Pathway fvi03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:fvi00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     122530551  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fvi03019]     122530551 Enzymes [BR:fvi01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      122530551 Messenger RNA biogenesis [BR:fvi03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      122530551 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N CbiA ATP_bind_1 AAA_16 AAA_22 MMR_HSR1 CTV_P13 nSTAND3 Motif Other DBs NCBI-GeneID:  122530551 NCBI-ProteinID:  XP_043513543 LinkDB All DBs Position Unknown AA seq 422 aa AA seqDB search MTDEKAQTQEFKLDPDCELRFEVESKNEKVTLELKSGLAEVFGTELVKGKKYEFIAGAKV AVFTWQGCTVELVGKTDVSYVAKETPMGLYLNCHAAMERLREAAEKEDTRGPITMVVGPC DVGKSTLCRLLLNYAVRMGRRPIFVDLDVGQGHIAIPGTVGALLVERPSNVVDGFSQQAP LVFHFGHKTPQANVALYNLLVTRLAEVCSDRLQANKKARVSGIVINTCGWVKGDGYKLLT HAAQAFEVDAILVLDQERLYNELVRDMPDFVKVVFLPKSGGVVERSQAQRTEARDQGVRE YFYGSRTPLYPHSFEVKWSEARLYKIGAPVLPASCMPLGMKAEDNLTKLVAVTPGPNLLH HLLSVSFADSPEDDVVQTNVAGFVCVTNVDVDRQTFTVLSPQPRPLPNTVLLLSDIQFMD SH NT seq 1269 nt NT seq  +upstreamnt  +downstreamnt atgacagacgagaaagctcagacgcaagagttcaagttagacccagactgcgagttgaga tttgaagttgaatctaaaaatgagaaggttacgctagagttgaaaagcggactagcagag gtttttggcacagaacttgtgaaaggcaagaagtatgaatttatcgccggtgctaaagta gctgtgttcacttggcaaggctgtacggttgagttagtgggaaagactgatgttagctac gtagctaaagagactccaatgggcctctatttaaattgccatgcagcaatggaaagactc agggaagctgcagaaaaggaggacaccaggggcccaataacaatggttgttggcccatgc gacgttgggaagtcaactctttgcaggcttttattgaattacgcggttaggatgggacgc aggccaatctttgtggacttggatgtaggccaaggccacatagcaatacctggcactgtt ggagcactgctggttgaacgtccttccaacgtagttgatggattcagtcagcaagcaccc ttagtgtttcactttggacacaaaacgccacaagccaatgttgctctttacaatcttctt gtaactcgccttgcagaggtctgttctgacagacttcaagcgaacaaaaaggccagggtg tcggggatcgtgataaacacctgtggctgggtgaaaggggatggatataagttattgaca cacgctgcccaggcattcgaggtggatgcgattctggtactggatcaagagaggctgtac aacgagcttgtcagagacatgccagactttgttaaagttgtgttcctgccgaagagtggt ggagttgttgagaggagtcaggctcaaagaacagaggccagagatcagggtgtcagggaa tacttctacggttccagaacaccgctctatccgcacagttttgaggtgaaatggagcgag gccagattgtacaaaatcggagctccagtcctccctgcgtcgtgcatgccgcttggaatg aaggcggaagataatctgacgaaactggtagctgttacaccagggccaaacctccttcat cacttgttatctgtctcgtttgctgattcaccggaggatgacgtagtgcaaaccaatgta gctggatttgtctgcgtgaccaacgtcgacgttgatagacaaacgtttacagtcttgagc ccgcaaccacgaccattgccaaacacagtcttactcttatcagatatacaatttatggac agtcattga

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