Frieseomelitta varia: 122531199
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Entry
122531199 CDS
T09482
Name
(RefSeq) probable DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
fvi
Frieseomelitta varia
Pathway
fvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122531199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fvi03400
]
122531199
DNA repair and recombination proteins [BR:
fvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122531199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
Adenylsucc_synt
Motif
Other DBs
NCBI-GeneID:
122531199
NCBI-ProteinID:
XP_043514865
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MSKVNTLYNYFISPKTPTTPKQLNNKRSSEEKSSTPKRAREQRNKAKTPSKGKENKDVKD
RKRVFKDDDDDDDDDDDDDKEKKEEEEQSELIRPKKRRLIIPDEESGEDSGDEFKPDPEN
ESEDSDTGSEGCTESEPPTASEEETPEKKIKLNKTSGRKQNDIKKIPKEDKKESKSQQQN
QAQGPNNVESWRHLKYDFLQPNKIRDINRRPPTDPEYDPKTLYVPQDFLNQQTPAMRQWW
EIKKKHFDCILFFKVGKFYELYHMDAVISVNELNLTYMRGEFAHAGFPEIGYGRFLASLV
ERGYKVARIEQTENPEMMAQRCSKMARPTKFDKVVNREICQISTKGTRVYTPQDVEPATA
NSNYLLSLVEKCPSGSNISHYGVCFLDTTIGDFYLCQFEDDRCNSRLLTLFAHYPPVHVV
YERGNLSQRTLKILNNALAACIKEPLLRESQFWSSTTTLKNLHEGEYFKKPNSEFQWPVG
LQPYLNQSDSLGLTPADDKELAVYALGGCIHLLKECLLEQQLLAQARFKTYTPPDFSNET
LKFANNMVLDAITINNLRIFGEGSLMKTLDRCCTAFGKRLLREWICRPSCRKNIIIERQE
AIQELMNNSDIVQSARNMLSGLPDLERLLSKIHAQGNAAKMNNHPDGRAIMFEGQTYSKK
KILDFTTTLSAFEDVLKIVALFEDFNSTLVSRCTKVEPDGEFPSLRESLDYFKTAFDHEE
AKKVGCIVPKRGVDDEYDSVLMELDDIKKDAEAYLQKQKQHFGVKVTYHGSDRKRYQIEI
PESQIKKVGIGYELQSQRKGYKRYYTNETKEFLSRQTNAEEHKNRVLKDLNRRIFAKFSE
KYDMWNMAVYKLSVLDVLISLTEYALSGDMCIPEICDGTDEGVFIDVREGRHPCILSDTF
IPNSTLLGTDSSASFMILTGPNMGGKSTLMRQVALLTIMTQIGSYVPASSCRLTLVDRIF
TRLGANDDILAGQSTFLVELSETAAILQHATPYSLVLLDELGRGTSTYDGTAIAASVVNA
LLKLNCRTLFSTHYHSLVEDYKNTKEITLAHMACMVETEEQDEVSQETVTFLYKLSEGAC
PKSYGFNAARLAGVPPVITNRAHEISKKLEQETNQKHVFASLCKANGTAIRDLIAAM
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtgaatacgctgtacaattattttatttctcctaaaactcctacaactcct
aaacaattgaataataaacgttcgtccgaagaaaaatctagcacaccgaaaagagcaagg
gaacaacggaacaaagcaaagactccgagtaaaggaaaggagaacaaggatgttaaagat
aggaagagagtctttaaagatgatgatgatgatgatgatgatgatgatgatgatgacaaa
gaaaagaaagaagaagaagaacaaagcgagctaatacgaccaaagaaacgaagattaatt
attcctgatgaagaatctggagaagattctggagatgaatttaagcctgatccagagaat
gaatcagaagattctgatacaggatctgaaggatgtactgaaagcgaaccaccaactgct
agtgaagaagaaactcctgagaagaagataaagttgaataaaacttctggaagaaaacaa
aatgatataaagaaaattcccaaagaagataaaaaggaatcaaaatcgcaacaacagaat
caagcccaaggtccaaataatgtggaatcttggcgacacttgaagtatgattttcttcaa
ccaaataaaatacgagatattaatagaagaccaccaactgatccagagtatgatcctaaa
acactttatgttcctcaggattttttgaaccaacaaactccagctatgagacaatggtgg
gaaataaaaaagaaacactttgattgcattcttttctttaaagtaggaaagttttatgaa
ttatatcacatggatgctgtaattagtgtcaatgagctcaatcttacatatatgagagga
gagtttgcgcatgcagggtttccagaaattggatatggtcgttttttagcgagtctcgta
gaaagaggctataaagtggctagaatagaacaaacagaaaatccagagatgatggcacaa
cgttgcagcaaaatggctagacctactaagtttgacaaagtagttaacagagaaatttgt
caaataagtactaaaggtacaagggtatatactccacaggatgtagaaccagctacggca
aattccaattatttgttatctctggttgaaaaatgtccatctggttccaatatatctcat
tatggagtgtgtttcttagacacaacaataggagatttttatctttgtcaattcgaggat
gatcgctgcaattctagattattaactttatttgctcattatccgccagtccatgtggta
tatgaacgaggtaatttgtctcaaagaactttaaaaattctaaacaatgctttagcagcg
tgtattaaagaaccgcttctacgtgaatctcaattttggtcgtctacaacaacgttgaaa
aatcttcatgaaggagaatatttcaaaaagccaaattccgagtttcaatggcctgtaggc
ttacaaccatatcttaatcaaagtgacagtttaggtttaacacccgctgacgataaagag
ttagcagtatatgcattaggtggatgtatacacctgctcaaggaatgtctgcttgaacaa
caactactggcacaagcacgtttcaaaacgtatactcctccagatttttcaaatgaaacc
ttgaaatttgcaaataatatggttttagatgctatcactattaataatttgagaattttc
ggggaaggttctcttatgaagacgctagatcgttgctgtactgcatttggaaagagattg
ttgcgagaatggatttgtagaccatcttgtcgtaaaaacattataatcgaacgtcaagaa
gctatacaagaattaatgaataattcagatatagtacaaagtgctcgtaatatgttaagt
ggactccctgatcttgaaagattattaagcaagattcatgctcaagggaatgcggcaaaa
atgaataatcatcctgatggcagagcaattatgttcgaagggcaaacgtattcaaagaag
aaaattctagatttcactactactctgagtgctttcgaggatgttttaaaaatagttgct
ttgtttgaagatttcaacagtacattagtaagtcgatgtactaaagtagagccggatggc
gagtttccttcgttaagagaatcattagattatttcaagaccgcgttcgatcacgaagaa
gccaagaaagtaggctgcatcgttccaaaaagaggtgtcgatgacgagtacgattccgtt
ttaatggagcttgatgatataaagaaagatgccgaagcataccttcaaaagcaaaaacag
catttcggtgtaaaagtgacgtatcacggatcggatagaaagcgatatcagattgagatt
ccagagtctcagataaagaaagttggaatcggttatgagcttcagtcgcagagaaaagga
tacaaacgctattataccaacgagaccaaggaatttctaagtagacaaacaaatgccgaa
gaacataaaaacagagtattaaaggatttaaacagaagaatattcgcaaaattcagcgag
aagtacgatatgtggaatatggcagtttataaattgtctgttttggatgttcttatttct
ttgactgaatacgctcttagtggagatatgtgtataccagaaatttgtgacggtacagat
gaaggggtatttattgatgttagagaaggacggcatccgtgtattctttcggacacattt
ataccaaatagtactttactaggaaccgatagttctgcctctttcatgattctcactgga
ccaaatatgggtggtaaatcaacattgatgcgtcaagtcgctcttcttactataatgaca
cagatcggaagttacgttcctgcaagttcctgtcgtttgactttagtagatcgtattttc
acgaggctcggagcaaatgacgatattttggctggtcagagtactttcttggtagaattg
agcgaaactgccgcgatattgcagcacgctacaccatactcgctagtgctgcttgatgaa
ttgggtcgtggtacgtcgacgtatgacggtacggcaatagccgcctcagttgtaaatgca
cttctgaaattgaattgtcgcaccttgttctctacacattatcattctctggtagaagat
tataaaaataccaaagaaattactttagcccatatggcatgtatggtagaaacggaggaa
caggatgaagtatctcaggagacggtaacatttttgtacaaacttagcgagggagcttgt
ccaaaatcatacggtttcaatgctgctcggttagctggtgtcccacctgtaattacaaac
agagcgcatgagatctcgaagaaactcgaacaagagaccaatcaaaaacatgtcttcgcc
agtctgtgcaaagcgaacggaacagctataagggatctgatcgctgcgatgtaa
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