Frieseomelitta varia: 122535062
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Entry
122535062 CDS
T09482
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fvi03016
]
122535062
Enzymes [BR:
fvi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
122535062
Transfer RNA biogenesis [BR:
fvi03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
122535062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-GeneID:
122535062
NCBI-ProteinID:
XP_043522185
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MSAPCQDIIEDIEDLISSQDITPKERYSTRKNVTVRPKRKQITEEVPQLSIHSSIVPGTQ
TIYVKTWGCTHNNSDSEYMAGQLAAYGYKLTENKYEADLWLLNSCTVKNPAEDHFRNEIQ
AGRKMGKHVVVAGCVPQGAPKSSFLQGLSMIGVQQIDRVIDVVEETLKGNIVRFLQQKKE
AGKKIGGASLSLPKIRRNPLIEIIAINTGCLNQCTYCKTKHARGELGSYPPEKIVEHAIQ
AFYEGVCELWLTSEDTGTYGRDIGSSLPELLWKLVEVIPNGCRLRVGMTNPPYILEHLEQ
MSKILKHPKVYSFLHVPVQSGSDQVLADMKREYTRADFELVVNFLRERVPGLTIATDIIC
GFPTETEKDFEETMKLCEKYKFPILFINQFFPRPGTPAARMPKVPTQEVKKRTKKLSEFF
QSYLPYDNRIGLVQDVLVTEISHDKKHYVGHNKFYEQILVPLREEYLGKMITVKIVETSK
YSMKGEPITEGVSPALKPCLPKGTISGIPMEMKPSKYKIGIILTLFLAIFLRLLWKFLTR
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccgtgtcaagacataattgaagatatagaagatttaatatcatcgcaagat
attacaccaaaggaacgatatagtacaagaaagaatgtcactgttcgtcctaaacgtaaa
caaataactgaggaagtgccgcaactctcaattcatagtagcattgtaccaggaacgcag
acaatctatgtaaaaacatggggatgcactcataataattctgatagtgaatacatggcc
ggtcagcttgctgcttatggttacaaattaacagaaaacaaatatgaagcagatttgtgg
ctcttgaattcctgcactgtaaaaaatccagcggaggatcattttaggaatgagattcaa
gctggaagaaagatgggaaaacatgttgttgttgctggatgtgtaccgcaaggtgctcca
aaatcatctttcttgcaaggattaagcatgatcggtgtgcaacaaatcgatcgcgtgata
gatgtagtcgaagaaactctaaaagggaacatcgtccggttcttgcagcagaaaaaggaa
gctggtaaaaaaatcggcggcgcctccttaagtttgccaaagattcgtaggaatccattg
atcgagatcatagctataaatacaggatgtttgaaccagtgtacctactgcaagacaaaa
catgccagaggtgaactgggaagttatcccccggagaaaattgtcgaacatgcgatacag
gcattctacgaaggtgtctgcgagttatggttaacctccgaagacacggggacttacggc
agagatattggctcgagtttgcccgaattactgtggaaactcgtggaagtaatacctaac
ggatgtagacttcgcgtaggaatgaccaatccaccgtatatcttagagcatctggaacag
atgagcaaaatactgaaacatccaaaagtctacagctttcttcatgttccggtgcagtct
ggaagcgaccaggtgctagccgatatgaaacgagagtacactcgtgccgacttcgagctg
gttgtcaactttctgcgagaacgtgttcctggattgaccatcgcgaccgacattatttgt
ggctttccaacggaaacagaaaaggattttgaggagacgatgaaactttgcgaaaagtac
aagttcccgattttattcatcaatcagttcttccccagacctggtacaccggccgcgcga
atgccaaaagtacctacgcaagaggttaaaaaaagaaccaaaaaattatcagaattcttt
cagtcttacttaccgtacgataacagaataggacttgtccaagatgtgctagtcacagag
atatcccatgataaaaagcactacgttgggcataacaaattttacgaacagattttagta
ccattgagggaggaatatttgggaaagatgatcacagtaaaaatcgtagaaacatcgaaa
tattcaatgaagggagagccaataaccgaaggtgtgtccccagcgttgaaaccatgttta
ccaaaaggaactatatctgggataccaatggaaatgaaaccatcgaaatataaaatagga
attattttaacacttttcttggctatctttctcaggctgttgtggaaatttttgacgcgt
tcttga
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