Candidatus Formimonas warabiya: DCMF_14565
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Entry
DCMF_14565 CDS
T07208
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00730
Thiamine metabolism
fwa01100
Metabolic pathways
fwa01240
Biosynthesis of cofactors
fwa04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DCMF_14565
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DCMF_14565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fwa03016
]
DCMF_14565
Enzymes [BR:
fwa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DCMF_14565
Transfer RNA biogenesis [BR:
fwa03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DCMF_14565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
ATP_bind_3
NAD_synthase
Gpr1_Fun34_YaaH
Motif
Other DBs
NCBI-ProteinID:
ATW25824
UniProt:
A0A3G1KTU1
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All DBs
Position
complement(3168473..3169651)
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AA seq
392 aa
AA seq
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MYELILVRYGELGLKGKNKHQFINRLVLNIKRALKDLPPREVESTWGRIWVPVKNDLDRT
MERLQQVFGIYSVSPVIKTEKDLDAVQKAALRVLHDALPQGGTFKVETKRSDKTFPMTSP
EISKAVGSYLFANSPDIYQADMYHPQHTIDVEIRGEGAFVYGQVIPGAKGLPVGSSGRAV
LMISGGIDSPVAGWMAMKRGVTFDAVHFHSFPFTSERAKQKVIDLCQVLARWGGKIRLHV
VHFTEIQKAIRQNCREEYGITIMRRMMFRLAERIAQQNRAFAIYTGESVGQVASQTLESM
FTINDVTNMPVLRPLVGMDKEEIIKIAQHIHTFDISIRPYEDCCTVFLPDFPKIRPRLDE
ARKMEEKLDIEGLLAEALDKTEVLEIFQEEIS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaattaattctggtacgctatggggaactgggcctcaaaggaaaaaataagcat
caatttatcaaccggctggtcctgaatatcaagagggccttgaaggatctgcctcccaga
gaggtagagtccacctgggggaggatctgggttcccgtaaaaaatgacctggaccggacc
atggaacggctgcagcaggtattcggtatttattccgtcagtccggtgatcaaaacagaa
aaggatttggacgccgtacagaaagcggctttaagggtactgcatgatgctctgccccag
gggggaacttttaaagtggagaccaaaaggtcggataaaacctttcccatgacgtctccc
gagatcagcaaagccgtgggatcctatctttttgccaacagtccggacatttatcaggcc
gatatgtatcatccccagcatacgattgatgtggaaatcaggggagaaggggcttttgtt
tacggacaggtgatacccggggccaagggactgcccgtaggatccagcggccgggcggtg
ctgatgatttccgggggtatcgacagcccggtggcgggctggatggccatgaaaaggggt
gttacctttgacgccgtccattttcacagctttccttttaccagtgaaagggcgaagcag
aaggtcatcgatctgtgccaggttttggcccggtggggtgggaaaatccgcctccatgtg
gtgcacttcacggaaatccaaaaagcgatccggcagaactgccgggaagaatacggcatt
accatcatgcgccgtatgatgtttcgtttggcggaaagaattgcccaacaaaatagggct
tttgccatttataccggagaaagcgtgggccaggtggccagccagaccctggagagcatg
tttaccattaatgatgttaccaacatgcctgtgctgcgtcccctggtgggtatggacaaa
gaagaaatcatcaaaattgcccagcacatccatacttttgatatttccatccgtccctat
gaggattgctgtaccgtgtttctgcccgacttccccaagattcgtccccggttggatgaa
gcccggaagatggaagagaaacttgacatagaaggtttactggctgaagcattagataaa
acagaggttttggagatattccaggaggagatttcatga
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