Candidatus Formimonas warabiya: DCMF_17395
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Entry
DCMF_17395 CDS
T07208
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00190
Oxidative phosphorylation
fwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
DCMF_17395
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCMF_17395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fwa03019
]
DCMF_17395
Enzymes [BR:
fwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
DCMF_17395
Messenger RNA biogenesis [BR:
fwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DCMF_17395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
PAS_3
Motif
Other DBs
NCBI-ProteinID:
ATW26299
UniProt:
A0A3G1KV20
LinkDB
All DBs
Position
complement(3837081..3839204)
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AA seq
707 aa
AA seq
DB search
MHKENSNFFNRELSWIEFNKRVLEEAQGRRHPLLERLKFASIVSSNFDEFYMIRVASLQD
QVLAGFREPDGSGMTPAQQLEAISGMVHETVEVLYQCFNESLVPALKKEGIHLLRAPDLT
AEQKANLAQFYQKTVYPVLTPLVVDQSRPFPLINNRSLNIALLLSNDEEEGEPLFATVQV
PSVLGRLVQVPVSEGRKSFVFLEDVIKLFLPTLFSGHQILAAGCFRVTRNADLDMEEEGA
EDLLDTIKESLRKRKWGGVIRLEIEKEMDANLVHMLKEQLEVPSEGIFPLNHPLDLTFLM
NLYGLEGFEHLKQRPLQPQIPPFFQQGGELFKAIGESDLLVHHPYESFDPVVEMVKQAAN
DPHVLAIKQTLYRVSGNSPLVNALAEAAENGKQVTVLVELKARFDEENNILWAKRLEQAG
CHVIYGIKGLKTHGKLLLVVRMEEDGIKRYMHMGTGNYNDFTAKLYEDLGFFTANPCFGA
DASILFNLISGYSELTDMYKLSVAPFNLRQRFIQLIRQEAEYARQGKPARILAKLNSLVD
GEIISELYAASQAGVEINLIVRGICCLRPGIAGLSENISVRSIVGRFLEHSRIYLFHNNQ
KEIILLSSADLMPRNLDRRLEILFPIEDEQLKSRVKKILETYLQDNVNARILNPDGSYRR
VEKRGRRALDCQDYFRRMAVHRSQDMDDEEIEKILTVYAPKDKENLA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaggagaattcgaatttttttaaccgggaattgagctggattgaatttaataag
cgtgttctggaagaagcccaaggccggcgccatcccctgctggaaaggttaaagttcgct
tctattgtcagttccaactttgacgaattctatatgatccgggtagcctctttgcaggac
caggtactggccgggttcagggagccggacggttcggggatgactcctgcccagcagctg
gaggctatttccgggatggtccatgaaacagtagaggttctttatcagtgttttaacgaa
tctcttgttcccgccttgaaaaaggaagggattcatttattgcgtgctccggatctcact
gccgagcagaaggcgaatttggcacagttttatcaaaagacggtttacccggtgcttacc
cctttggttgtggatcagagccggccctttcccctcattaataatcggagccttaacatt
gccctcttattgtcaaatgacgaagaagagggagaacccctttttgctactgtccaagtt
ccttctgtgttaggccgtttagtacaggttccggtttccgagggcaggaagtcctttgtc
tttctggaggatgtgatcaaactttttctgcctaccttgttcagcggccatcagattttg
gctgcaggctgttttcgcgtcacccggaatgcggatttggacatggaagaggaaggggcg
gaggatctgctggacacgatcaaagaatccctgcgcaaaagaaaatggggcggcgtgatc
cggctggaaatagaaaaagagatggatgccaatctggtgcacatgctcaaggaacaattg
gaagttccctcagagggaattttccccttaaatcaccccttggatctgaccttcctgatg
aacctttatgggctggaaggctttgaacacttgaagcaacgtcccttgcagccccagatt
cccccttttttccaacagggcggggaactatttaaagccattggggagtctgatttactc
gtgcatcacccctatgaatccttcgacccggtggtggaaatggtgaaacaggcagccaat
gacccccatgttttagcgatcaaacagaccttataccgggtgagcggcaattcacccctt
gtcaatgccttagccgaggccgcggaaaatgggaagcaggttacggttttagtggaattg
aaagcgagatttgacgaggaaaataatattctttgggctaagcgtctggaacaagcgggc
tgtcatgtgatttacggcattaagggtctgaagacccatggtaaactgctcttagttgtc
cgcatggaagaggatgggattaaacggtacatgcacatgggcaccggcaattataatgat
tttacggccaagctgtacgaggatctaggtttctttacggccaatccctgcttcggggcg
gatgcctctatcctttttaatctgatttcagggtattccgaattgaccgatatgtacaag
ctttctgtggcgccctttaatttacgccagagatttatccaactgatccggcaggaagcg
gagtatgcccggcaggggaagccggcgcgcattctggcaaaactaaactccctggtggat
ggggaaattatttctgaactttatgccgcatctcaagcaggtgtggagattaacctgatt
gtccggggtatttgctgcctgcggcccggtatcgcgggtttgagtgaaaacatttccgtc
cggagcatcgtggggcggtttttggaacacagccggatctatctgtttcataacaaccag
aaagaaatcatccttctgtccagcgcggatttgatgccccggaatctggaccggagactg
gagatccttttccccattgaggatgagcagctgaaaagcagggtcaaaaagattctggaa
acttatttgcaggataatgtcaatgccaggattttaaacccggacggcagttaccggagg
gtggaaaagagaggaagaagggctttggattgccaggactattttagacgcatggccgtg
catcggtctcaggatatggatgatgaagaaatcgaaaaaatattaacggtatatgcgccg
aaagataaggaaaatctcgcctaa
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