Flammeovirga yaeyamensis: KMW28_13140
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Entry
KMW28_13140 CDS
T07356
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
fya
Flammeovirga yaeyamensis
Pathway
fya00540
Lipopolysaccharide biosynthesis
fya01100
Metabolic pathways
fya01250
Biosynthesis of nucleotide sugars
Module
fya_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
fya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KMW28_13140 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fya01005
]
KMW28_13140 (rfaD)
Enzymes [BR:
fya01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KMW28_13140 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
fya01005
]
Core region
KMW28_13140 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
TniB
Motif
Other DBs
NCBI-ProteinID:
QWG00596
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Position
1:3354550..3355521
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AA seq
323 aa
AA seq
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MIVVTGAAGFIGSCMISRLNEDNFNHIIAVDDFSFPEKNKNLEGKKILERVEREEFFDWL
DKNHLEVEFIFHLGARTSTAEFNRDILSHLNTEYTKKMWNATIQYAIPLVYASSAATYGL
GELGYEDSEEIIPNLKPLNPYGESKNEFDKWALQQERQPMFWAGLKFFNVYGPNEYHKER
MASVIFHAFNQIGKTDAMKLFQSHNPDYKDGEQQRDFVYVKDVVEMMMFLMHHRKAEDSG
IYNVGTGEARTFLDLTKATFKAMGIEENISYIPTPEDIRDKYQYFTEATMQKMRSIGYDK
PFTSLEEGVEDYVKNYLMDTKRY
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtagttacgggtgcggctggctttattggtagttgcatgatatctagattaaat
gaagataattttaaccatattatcgctgtagatgacttctcttttcctgagaaaaataaa
aatttagaaggaaaaaaaatattggaacgtgtagaaagggaagagttttttgattggtta
gataaaaatcaccttgaggttgaattcatttttcatttaggtgcaagaacaagcacagcg
gagttcaatagagatatcctttctcatttgaatacggaatacactaagaaaatgtggaat
gcaactattcaatatgcaatccctttagtatatgcctcttcagctgcaacttatggctta
ggtgaattaggatatgaagatagtgaggaaattattccaaacttgaaacctctaaaccca
tatggagagtcaaagaatgagttcgataaatgggctttacaacaagaaagacaacctatg
ttctgggctggattgaaattcttcaatgtttatggtcctaatgaatatcataaagaaaga
atggcttctgttattttccatgcgtttaatcaaattggaaaaacagatgcaatgaaattg
ttccaatctcacaacccagattataaagacggagaacaacaacgtgatttcgtttatgta
aaagatgttgtagaaatgatgatgttcttaatgcatcatagaaaagctgaagattcaggt
atttacaatgttggtactggtgaggcaagaactttccttgatttaactaaagctactttt
aaagcaatgggcattgaggagaatatttcttatatccctactccagaagacatcagagat
aaatatcagtattttactgaagcaacaatgcaaaaaatgagatctattggatatgacaag
cctttcacttccttagaagaaggtgttgaggactatgtcaaaaactatttgatggatacg
aaaagatattaa
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