Gossypium arboreum (tree cotton): 108451062
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Entry
108451062 CDS
T05776
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00900
Terpenoid backbone biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108451062
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gab01006
]
108451062
Enzymes [BR:
gab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108451062
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
108451062
2.5.1.29 geranylgeranyl diphosphate synthase
108451062
Prenyltransferases [BR:
gab01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108451062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
CdiI_2
Motif
Other DBs
NCBI-GeneID:
108451062
NCBI-ProteinID:
XP_017604285
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All DBs
Position
10:complement(26184450..26185388)
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AA seq
312 aa
AA seq
DB search
MAKAFSHINGNPMFYFPSRPNPNRPFPLLLSYNKPLKVTMSCNQSYWASINEDIEEHLKQ
AIPIREPLSVLEPMHHLTFAAPRTTASALCVAACELVGGHRDRALPAASTIHLLYAASFT
HEYVPRSETSRPMSKIQHVYGPGIELQIGNAMIPFGFELLAKSDDPARNDSDRILRVMVE
ITRAIGSEGMIYGQYDEVESYQSDNNKSSHIEEIERVSEKYEGTLYACAGACGAIIGEGC
EDEIEKMRKYGLYIGKIEGIMSRIGSSSDKDLMEKLVEELRNLANNELRGFNEAKVKAIF
NTQSSPFDLCKQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagctttctcccacatcaatggcaacccaatgttttattttccctctagacca
aatcccaaccgtccatttcctttgcttttgtcttataacaagcctttgaaggttaccatg
tcatgcaaccaatcttattgggcctctataaacgaagatatcgaagagcatctcaaacag
gctatccctatacgtgaaccgctctctgtattggagcccatgcaccatttaacgtttgct
gccccacggaccaccgcttcggctttatgcgtggcggcttgtgagttggtcggtggtcat
cgtgatcgagctttgccagcagcgtcgacgattcatctcttgtatgcggcttcgttcacc
catgagtatgttccacggagtgaaacctctaggcctatgtccaaaattcaacatgtgtat
ggtccaggcattgagttacaaattggtaatgcaatgataccatttgggttcgagcttttg
gctaaatccgatgatccagcccgaaatgactcggatcgaattctacgtgtgatggttgag
atcacacgtgcgattggttcggaaggaatgatttacggacagtacgatgaagtggaatct
tatcaatccgacaataacaagtcgagccacatcgaagaaatcgagcgtgtctccgaaaaa
tatgaaggaacattgtatgcttgtgcgggtgcttgtggagcaataataggagagggatgt
gaagatgaaatagagaaaatgagaaagtatggtttatatatagggaaaatagaagggatt
atgagtagaattggaagcagtagtgacaaggatttgatggaaaaattggtggaggagctg
agaaatttggctaacaatgaactgagagggttcaatgaagcaaaggtgaaagcaatattc
aacacacaatctagtccatttgatctttgtaagcaatga
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