Gossypium arboreum (tree cotton): 108452250
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Entry
108452250 CDS
T05776
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00052
Galactose metabolism
gab00511
Other glycan degradation
gab00531
Glycosaminoglycan degradation
gab00600
Sphingolipid metabolism
gab00604
Glycosphingolipid biosynthesis - ganglio series
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108452250
09103 Lipid metabolism
00600 Sphingolipid metabolism
108452250
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108452250
00604 Glycosphingolipid biosynthesis - ganglio series
108452250
00511 Other glycan degradation
108452250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108452250
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
108452250
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108452250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
108452250
NCBI-ProteinID:
XP_017605511
LinkDB
All DBs
Position
10:49479272..49487720
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AA seq
738 aa
AA seq
DB search
MNRSKSLAATSKSITAMARKRSSKTTLIFFLLLSLLAFLSFLPVFASLPSLPSYSHSHDL
HFHLPRHQRLHRRQKISVRKFEIAEDKFWKDGKPFQIIGGDLHYFRVLPEYWEDRLLRAK
ALGLNTVQTYIPWNLHEPEAGKLVFEGIADLVSFLKLCQKLGLLVMLRAGPYICAEWDLG
GFPAWLLSIHPDVRLRSSDPAYLQKVEGWWGVLLPKVAPLLYGNGGPIIMVQIENEFGSY
GNDKAYLSHLVKLARGHLGEDIILYTTDGGSRETLEKGTIQGDGVFAAVDFTTGDNPWPI
FKLQKQFNSPGKSPPLSSEFYTGWLTHWSEKMARTDADFTAAALEKIMLQNGSVVLYMAH
GGTNFGFYNGANTGADESDYKPDLTSYDYDAPITESGDVDNAKFKAIRRVMGKFSSVSLP
SVPPNNKKTGYGSIQLKRTAFLFDLLDEIDPLHIVEAESPTAMEYLNQMFGFVLYVSEYV
AKTGGSKLVIPKVHDRAQVFISCSPEVNGGQVSYVGTIERWSNQAINLPNVKCVSSTSLF
ILVENMGRVNYGPYIFDRKGILSSVYVDGSVLKRWKMISIPFHNLNEVPKFNPVIQVASK
FHKVSAGKKLEHKSVGVGGPSFYTGHFSIDTKTEVTDTYISLRGWGKGIAFVNEFNIGRY
WPTSGPPCNLYIPAPILRQGENVLVIFELESPNPELMVDSVDQPDFTCGPGQASVHQNED
GKASASLLTPNPLGLRTF
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaagtaaaagcctagctgcgacctccaaatcaattacagcaatggcgaggaag
cgaagcagcaaaactacgttgatcttcttccttttgctttcccttttagctttcctttct
ttccttcccgtcttcgcttctctcccttctcttccctcttactctcactctcacgatctt
cactttcatcttcctcgtcatcagcgtctgcatcgccgccaaaagattagtgttagaaaa
tttgaaattgcggaggataagttttggaaagatgggaagccttttcagataattggtggt
gacttgcactatttccgggttcttcctgagtactgggaagataggcttttgagggcaaaa
gcattggggttgaataccgttcaaacatatattccttggaatttgcatgaaccagaggct
ggcaaacttgtttttgaaggcattgcagatttggtatcatttctcaaactttgccagaaa
ctaggtctccttgttatgcttcgagctgggccttatatatgtgcagagtgggatcttgga
ggcttcccagcttggttactttccatacatccagatgttagattaaggtcatcagatcct
gcttaccttcaaaaggttgaaggatggtggggagtccttcttccaaaagtagctcctctt
ctttatggaaatggaggccctatcataatggttcagattgaaaatgaatttgggtcatat
ggaaatgataaagcttatcttagtcacttggtgaagttagctagaggacatcttggagaa
gacattattttgtacactactgatggaggctctcgagaaactcttgaaaaagggaccatt
cagggagatggtgtctttgcagctgttgacttcactactggtgataacccttggcccata
ttcaagttacaaaagcagttcaattcccctgggaaatcaccaccgctttcttcggaattt
tacacaggttggcttacacactggagtgagaagatggcaaggacagatgcagattttact
gcggctgccttggaaaaaattatgttacaaaatggttctgttgtgctttatatggcacat
ggtggaacgaactttggattttataatggagcaaatactggtgcagatgagtcagattac
aagcctgatctaacatcctatgattacgacgcaccaattacagagtctggtgatgtagac
aatgcaaaattcaaagccattaggagagtgatggggaaatttagttcagtatctctacct
tcagttcctcccaataataaaaagactggatatggatccatccagttaaaaagaacagca
tttttatttgatttacttgatgagattgatcctcttcacattgttgaggcagaatctcca
actgcaatggagtatttaaaccagatgtttggatttgtattatatgtatctgaatatgta
gccaaaactggtggaagtaagctagttataccaaaggtgcatgacagagctcaagtgttc
atatcgtgctctcctgaagttaatggtgggcaagtatcatatgttggtacaattgaaaga
tggtcaaatcaagcaattaaccttcctaatgttaaatgtgtttctagcaccagcttattt
attttggttgaaaacatgggtcgtgtaaattatgggccatacatctttgataggaagggt
attttgtcttctgtttatgtggacgggagtgtactgaaaagatggaaaatgatctcaatt
ccttttcataacctgaatgaggtgccaaaatttaatcccgtcattcaggttgcatccaaa
ttccataaagtatcagccggcaaaaaactagaacacaagtcagttggtgttggaggacca
tcattctacactggccatttctctattgatacgaagactgaagttactgatacatacatt
tcacttagaggctggggaaaagggattgcttttgttaatgaattcaacattggaagatat
tggccgacttcaggacctccatgcaacctttatatccctgctccaatccttcggcagggg
gaaaatgttttggtgatattcgagttagaatcaccgaaccctgagctcatggtagattcg
gttgatcagccagatttcacttgtggtccaggacaagcaagtgtgcatcaaaatgaagat
ggcaaagctagtgcgtcactgttaacacccaatccactagggctgcgtactttttga
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