KEGG   Gossypium arboreum (tree cotton): 108454636
Entry
108454636         CDS       T05776                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03020  RNA polymerase
gab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108454636
  09124 Replication and repair
   03420 Nucleotide excision repair
    108454636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gab03021]
    108454636
   03400 DNA repair and recombination proteins [BR:gab03400]
    108454636
Transcription machinery [BR:gab03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108454636
  RNA polymerase III system
   RNA polymerase III
     108454636
  RNA polymerase I system
   RNA polymerase I
     108454636
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108454636
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 108454636
NCBI-ProteinID: XP_017608652
UniProt: A0A0B0NVI9
LinkDB
Position
11:complement(54136681..54138451)
AA seq 144 aa
MADDDYNDMDMGYEDEPPEPEIEEGAEEDLENNNNDDVPLEPIETEDNVDQDAKDKTTRK
TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
GSYEDWGVDELIVEDSWKRQVGGD
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcggacgacgactataatgatatggacatgggatatgaggatgagccaccagagcct
gagattgaagaaggagctgaggaagatttggaaaacaataacaacgatgatgttcctcta
gaacctatcgaaaccgaagacaacgtagaccaagatgctaaagacaaaactactcgtaaa
acatcaaagtatatgaccaaatacgagcgtgctagaatcttgggtacccgagccttgcaa
atcagtatgaatgcacctgttatggttgagttggagggtgagaccgacccacttgagatt
gccatgaaggagcttcgagagcggaaaataccctttaccataagacgctacttgcccgat
ggaagttatgaagattggggagtcgatgagttgattgtggaagactcgtggaagagacaa
gtcggaggcgattga

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