Gossypium arboreum (tree cotton): 108458416
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Entry
108458416 CDS
T05776
Name
(RefSeq) ribosomal RNA small subunit methyltransferase, mitochondrial
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108458416
Enzymes [BR:
gab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
108458416
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108458416
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
PrmA
Methyltransf_11
Methyltransf_12
Ubie_methyltran
MTS
UPF0020
Methyltransf_31
CMAS
Methyltransf_4
Met_10
PCMT
Methyltransf_18
tRNA_U5-meth_tr
DREV
Methyltransf_23
Spermine_synth
DOT1
Methyltransf_28
BpsA_C
FtsJ
Cons_hypoth95
IgG_binding_B
Motif
Other DBs
NCBI-GeneID:
108458416
NCBI-ProteinID:
XP_017613296
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All DBs
Position
1:135357704..135359617
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AA seq
393 aa
AA seq
DB search
MLFKLKSVRTHFSGLIFFQNYQRNLWVKPSHRYGKYNEEDDDDKDPKLRNTKENQLDHFY
LYKSKGQHLLTNTRILDAIVRRSNIKPTDTVLEIGPGTGNLTVKLLEAAEKVVAVEVDKR
MVDVLHKRVAENGLQERLNVICKDAMKVEFPQFDLVVANIPYGISSPLIAKLVYGRNPFR
SATLLLQKEFARRLLAEPGDADFNRLAVNVNLVADVEFVMDVSKREFLPCPKVDSSVVII
RPKPELPDVNLNEWRAFTRTCFGKKNKTLGATFKQKKKVMQLLKLAKTTSLNKENPPTGN
NYECDEYYDGKYEDGDTDGEECFASSTSDLEMNLFKEKIVGILRKGGFEDKRPSKVSNED
LLHLLSLFNQAGIYFHDHVKPNDLGNANAAYLS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcaagctgaaatcagttcgaacccacttttctgggttaattttcttccaaaat
tatcaacgaaatctctgggtaaaacccagtcatcgttatggcaaatacaatgaagaagac
gatgatgataaagacccaaagcttcgaaacacgaaagagaaccagttagaccatttttat
ttgtataagagcaaaggccaacatttgcttactaatacacggattctcgacgctattgtt
cgaagatcgaacataaagcctactgataccgtcttggaaatcggacctgggaccggaaat
cttactgtcaagctactggaagctgccgaaaaggttgtcgccgttgaagtagataagagg
atggtggatgttcttcataaacgcgttgctgagaatgggttgcaagagagactcaatgtt
atatgcaaagatgcaatgaaggttgagttccctcagttcgatcttgttgtggccaacatt
ccttatggaatatcttcccctctcatagctaaattggtttatggaaggaacccttttagg
agtgcaacattgcttcttcaaaaggagtttgcacgccggttacttgctgagcccggggac
gcagacttcaaccgattggccgtgaatgtgaacttggtagccgatgtagaattcgtcatg
gacgtaagcaaaagggagttccttccttgcccgaaagtcgattcctctgttgtaataatc
cgaccgaaacctgaactccctgatgttaatcttaacgagtggagagctttcacaaggact
tgttttggcaaaaagaacaagacccttggcgctacctttaagcagaagaagaaggtgatg
cagctactgaaattggctaaaacaacgagcttgaataaagaaaatcctccgacggggaat
aactacgaatgtgatgagtattacgatggcaaatacgaagatggagataccgatggtgaa
gaatgttttgcatcctctacctctgatcttgaaatgaacttgtttaaggagaaaattgtt
gggattttgagaaaaggtgggtttgaagataaaaggccttcaaaggtgagtaatgaggac
ttattacatttactctctttgtttaatcaagctggaatatattttcatgatcatgttaaa
ccaaatgatttaggtaatgcaaatgctgcttatctttcatag
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