Gossypium arboreum (tree cotton): 108461128
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Entry
108461128 CDS
T05776
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00906
Carotenoid biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
108461128
Enzymes [BR:
gab01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
108461128
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
FAD_oxidored
HI0933_like
NAD_binding_8
Pyr_redox_3
Pyr_redox
FAD_binding_3
FAD_binding_2
Trp_halogenase
GIDA
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
108461128
NCBI-ProteinID:
XP_017616330
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Position
13:complement(70961288..70963311)
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AA seq
497 aa
AA seq
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MDTLLRTHSKLEFSVLLHGFSEKACKTNQEVKFVPKKRRVPNGCVKVKASSSALLELVPE
TKKENLEYELPMFDPSKGAVVDLAVVGGGPAGLAVAQQVSQAGLSVCSIDPSPKLIWPNN
YGVWVDEFEAMDLLDCLDTTWSGAVVYIDDGKKKDLDRPYGRVNRKQLKSKMLLKCISNG
VKFHQAKVIKVIHEESKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQMAYGI
LAEVEEHPFDVEKMVFMDWRDSHLSDSKELKERNSRIPTFLYAMPFSSNRIFLEETSLVA
RPGLPMDDIKERMVARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHP
STGYMVARTLAAAPIVADAIVRCLDPGKNLMGNKLSTEVWRDLWPIQRRRQREFFCFGMD
ILLKLDLPATRRFFDAFFDLEPHYWHGFLSSRLFLPELITFGLSLFYHASNTSRLEIMGK
GTVPLVNMINNLVKDRE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggatactttacttagaacacatagcaagcttgaattttcagttttactccacgggttt
tcagaaaaagcttgtaaaaccaaccaagaagttaagtttgttcctaagaaaagaagagtc
cctaatggttgtgttaaggttaaggcaagtagtagtgctcttttagagttagtccctgaa
actaaaaaggaaaatttagaatatgaacttcctatgtttgatccatcaaaaggtgctgtt
gtggatttagctgttgttggtggtggtcctgctggtttagctgttgctcaacaagtttca
caagcaggactttcagtttgttcaattgatccatcaccaaaattgatttggcctaataat
tatggtgtttgggttgatgaatttgaagctatggatttgcttgattgtcttgatacaacc
tggtctggtgctgttgtgtatattgatgatggaaaaaagaaagatcttgatagaccttat
ggaagggttaataggaaacagcttaagtcgaaaatgctgttaaagtgtatatctaatggt
gtgaaattccatcaagcaaaggttattaaggttattcatgaggaatcaaagtctttattg
atttgtaatgacggtgttacggttcaagctactgttgttcttgatgctactggattctcg
aggtgtcttgttcaatatgataagccatataatccggggtatcaaatggcttatggaatt
ttagctgaggttgaagaacatccttttgatgttgaaaagatggtttttatggattggaga
gattcgcatctttccgatagtaaggagttgaaggagagaaatagtagaattcccacgttt
ctttatgcgatgcccttctcgtcaaaccgaatatttctcgaggaaacttctctagttgct
cgaccaggcttgcctatggatgatatcaaggaaagaatggtagctaggttaaagcaccta
ggaataaaagttaagagcatcgaagaggacgagcattgcgtcattccaatgggcggtccc
cttccggttttaccccaaagagttgtgggaattggcggaacagcgggaatggtgcacccg
tcgacgggttacatggttgcaagaacactagcagctgctccaatcgttgcggatgctatc
gtccggtgccttgatccgggaaagaacttgatgggaaacaaattgtctactgaagtatgg
agagatttatggccaatacaaagaaggagacaaagggaattcttctgtttcgggatggat
attctacttaagctcgatttaccagcaacgagaaggttttttgatgcgtttttcgatttg
gaacctcattattggcatggattcttgtcatctagattgtttctcccagaactcataact
tttgggctatcactgttctatcatgcctctaatacctctaggttagagattatgggtaag
ggaactgttcctttggtcaacatgatcaataatttagtgaaggatagagagtaa
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